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LotjaGi1g1v0105500.2

Overview

Field Value
Gene ID LotjaGi1g1v0105500
Transcript ID LotjaGi1g1v0105500.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Serine/threonine-protein kinase; TAIR: AT5G60900.1 receptor-like protein kinase 1; Swiss-Prot: sp|Q39202|RLK1_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase RLK1; TrEMBL-Plants: tr|A0A072V8H5|A0A072V8H5_MEDTR Lectin kinase family protein; Found in the gene: LotjaGi1g1v0105500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:16291367..16296641) extracted from Lotus japonicus Gifu genome v1.2.

AAATCATAGTCTCAATTTTCATTTTCCTTTCACAAACAACTTGATGCTCTTTTCTTTTCAACATACATAAGCTAGCTAAT TCCCTATGGTTCAGCTAACACTAACATGCTGGTTTTCTTTCTTGTTCTTTACACATCTTCTATCTTTATCAGGTACTCAG TTATTTATAAATCAATTAATTAGTTATAAGCATGAGTGCTTATACCAGTGTTTGACAGAGCTTATGCAAACAACTTATAG TGTATTATAAGTTGTTTTATCTTATTTTCATAAACTATAACTTATAAAAAAAAGCTTATGCTTATATTTAGTTTATTTTC AATTTATTTTAATAAATTTTTTAGAATAGCTTATAAATAAGCGCTTATAAACTGTTTTTCGATACAGGACCTAGTTTTAA TTAATGAATTAATTTGCAGGGGTTATTTCAGTAACATTCACTTTAGTTAACAAATGCAACTACACCGTGTGGCCAGCTGC GACCACCACCACCAGCGGCGGAAACCTCTCAACCACCGGCTTCGTCTTAAACTCCGGCGACTCCTCCACCGTCACGGTAC CGTCTGACTGGAGCGGCCGATTCTGGGGCCGGACTCTCTGCTCGACGGACCGCACCACCGGGAACTTCTCCTGCATCACC GGCGACTGCGGCACAGGGAAGGTCGCATGCGGCGGCAATTCAGGATCGCCGCCGGCCACGCTGGCGGAGTTCGGTTTGAA CGGTGCCAACAACCGAGATTTCTTTGACGTCAGCTTGGTAGACGGTTACAACCTCCCTTTGGCGATTATTCCGTTGAGGG GGAACTGCAGCAGCTCCGGGTGCCGTGCGGATCTGAACGCGAAGTGTCCGTCGGAGCTGAAGGTTACGGCGGAGCAAGCG GTGGTGGCGTGCCGGGGACCTTGCGCCGCGTTCAATTTGCAGGTTTTTTGCTGCGCCGGGAATTATTCGTCGCCGTCGAG TTGCGAGCCGAGTGTGTACGCCAACATTTTCAAGGAAGCGTGCCCGCAGGCGTATAGCTACGTCTACGATGACAGTACGA ACACCACGTTTACTTGTGCTTCTGCCACAGATTACAACATCACGTTTTGTCCTTCCCCTTCTTCCAATGACACCAGGTTA GATACTAGATAGTGACATAGTGTGTTTTGAAAACTTTTCTGCAATCGAATCGTCTCTGCCGGAATTCGATTCCGCAGAGA AGATTCGTGATTTCAGAATTGATTCTGATGAAAGAGAAGCGAATTCGAAATCAATTCTGCTGCTTGTAGAAACTACTCTA ACAACATCTCCAATGGGATTGCTTAATCTAGTTGGAGCACTTAAGCAACTTTGCTTTAAGCAACGGTTGCTTCTTTCAAC TAAAAAAATATATTTTCTCTTTTATTCATGAACTTGAATAGTGTCGTGACCTTGAAATAATATAAATATAAGAGGTATAG TAGGACCCAAACAAAAGTAAAATAAGCAGCTAATTCTGCTTGGGTTGCTTAAACTCTATGTGGCAGTTTGGGTCCACCAG AATAATGTTTAAGCAACCCAACTAGTAACCTTCATTGGAGATGCTCTGAGATGAAATAATATATTTTTGGGGTCTATGCT ATTTTGCTTAAAAGACATATGATCTCAATTGTTCAAAATTATTATATGGATAATAACATAATGACCTCAAAACATATCAC AGTCTGATTTTTTGGAATGTCCAGAGTATTAAACAACCACAACTCCAATAGAAATTATTAGTTAATCAGTTACATGTGGT AGTTGTTAGGGGTGTTCGCGGATTGGATTGGTTCGGTTTTGAAGGAAAAATCATCTGATCCAATCTCATCAGTTTTATGA TTTTTATCATGCAATGGATTTGTCTCAAAATTCAAATCCGATCCAATTCAATCTATAGCGAAATTCCTATGGTAGTTGTA TTCTGTTTTTATTTCTGTTTCTAGTTAGTTAGTTAGCCCTCTACTTCTTCAGCAAATTCCAGTCATGTTGTATAAATATA TGATTGCATTGTAATGGTAACCAAGCAAGTTGAATCAATTCTTTCAAATTCATTGTTCATATCTTTGTTCTCTGGTTCTA GTTTTATAAGAGATATTGCATCAGCTTTCTTTTAGTTAATCTTTTATAAACAAAGTTACATGAGATAGTTAGAATGATAT TGCTAAACACTTAAACAATTTCTTTAGATTAATAACAAAAGACAAATGAACCAACAAATAGATACATAAGGTCCTAAATT TAAAAGAAAAATAATATTGTTCACATTTTGATGAGAGCTTTCACAGATTTTGCATTGGAGTTGTTTAGTACATTTGATTT CAGCTTGGACATGAGATTACATATTGATCTGCACTTGGATAGTTAACAGAGCACTTTCTATTCCACCTACTCATAGGTTA CTGATTACTATTAATTTCCAAAATATAATGCAGCTTGGGATCACTGGACCAAGGTGCGGCGAGTGTTGGCGTCTCATCCT CACTTACTGCTGGAAGTGAAACAACTCGGTGGCTTTCTCCATCAGGTGATTTTGCATTTGGATTTTATGAACTTCCAAAT GAGCTTTTCTTGTTAGCTATATGGTATGACAGCATAACCAATGGGAGCATCGTTTGGTATGCAAATGGAGACAACCCTGC TCCTAAAGGATCAAGGTTGGAACTGAATGACTCCCAAGGGTTAGTGCTCACCAGCCCTCAAGGTTCAGAGCTATGGAGAT CATATTTCAGATCTGGTACAGTTTCCAGTGGTCTAATGAATGATGCTGGGAATTTTCAGCTGAGAGACAAAGATTTTGTG GTATTATGGGATAGTTTCAGCAATCCTACTGATACATTGGTGCCTACTCAAGTTCTGGAGTTAAATGGCAATCTTTCTTC TCGACAAGGAGAGTTCAACTTCTCACGTGGACGGTTCAAACTTCGTCTACAACAGGATGGGAATCTTGTATTCAACCTTA TTAATTTGCCTAGCAACTACAATTATGAGCCTTACAATAGCACACGCACTGCTGATGCTAAAAATCAAACAAATGCTGGC CAAAGTTTGATATTTGACAAATCAGGATTTTTGTACGTACTGAAGAATAGTGGTGAGAAGTTTTATATCACTTATCCAAA TGAGACAGTCTCAACTGATGGCTTCTATTACAAAGCAACACTCAATTATGATGGAGTTCTCACCATAGCATATCACCCTA AAGATCCAAAAAACGGAACAAGCTGGGTTGTTGTTAAAACTAGACCAGAAAACATATGTTTGAATTCTAGATTCACGGAA GGTGAAGGTGTTTGTGGGTTTAATAGCATCTGTACCATTAAAGAAGACCAAAGGCCAATGTGTACCTGCCCAGATGGATA TTCTCTAATTGATTCCAGTAACATGTATGGTGGTTGTATCCCAAATTTTCAAGTCATTTGTGAAGCCAGTGGGAAACGGG GTTCACAGGATGATCTATATACAATGATGGAATTGCCAAACACTGATTGGCCTAAATCTGATTATGAAACATTAAGTCCT TCTACTCTACAAGAATGTAAGGAATCTTGTATGCAGGATTGCTCATGTGTGTTGGTTTCTTTCAACCAAAGCACCTGCTC GAAGAAGAAGCTCCCACTCTCATATGGGAGGAAAGATCAGGAAGTAGAAGGAGTTTCTGTCATGAAATTGATGAAAAATG ATCCTCTTGCCTCCTTCCCCAATATGAAGAAAGATCATGATACTTTGATCATTGTGATATCCGTTCTGTTTGGCACCTCT GTTTTTGTCATTTTAATGTTGGTTGGATCAATATGTTTTGGGTTCCCTTACAGCCTCAAGAAAATCAAAAGAAGTAGAAC CAAGACCAACAAAGGTTTCTTCGACAAAAATTTGCGCAATTTCACCTTCAAGGAAATTCAAGAAGCAACAAGCAACTTCA GAGAAGAACTGGGAAGGGGATCTTGTGGCATTGTCTACAAAGGAGAGATAGGGATGACTGGTGTAGCTGTTAAGAAATTA GACAAGTTGTTCCAAGACAGTGATAAGGAATTCCAGACTGAAATGAATGTGATAGGCCAAACTCATCACAGGAACCTCGT TCGCCTTCTTGGATATTGCAATGAGGGACAACACCGGATGCTGGTGTATGAGTTGATGAGCAATGGCACCTTAGCAAGCT TCCTTTTCACCCCATTAAAACCAAACTGGAACCAAAGAGTACACATTGCCCTTGGGATTGCAAGAGGCCTTGTTTACTTG CATGAGGAATGTTGCACCCAAATCATCCATTGTGACATTAAGCCACAGAATATACTTCTAGATGATCACCACAATGCCAG GATTTCAGATTTCGGGTTAGCAAAGCGGTTATTGATCAATCAAAGCCGCACTGAAACTGGAATTAGAGGAACCAAAGGGT ATGTTGCACCAGATTGGTTTAGGAGTGCTCCGGTCACTGCTAAGGTTGATACTTATAGTTTTGGTGTATTATTATTAGAG ATCATTTGCTGTAGAAAAAATGTAGAAAAAGATCTTGTTGATGAAGAAAAGGGGATTTTAAGTGACTGGGCTTATGATTG CTACAGGTCTAAAAGATTAGACATTCTTCTAGAAAACGATAATGATGCTGCCATGGACACAAAGAGCTTCGAGAAGTTTG TCATGATTGCTATATGGTGCATTCAAGAAGATCCCTTTCTAAGGCCAACAATGAAGGAAGTTTTGCACATGCTTGAAGGA ATTGTTGAAGTTACAATTCCCCCAAGTCCCTACCTCTATGGTTCTGTTAGTTGCCATTGATATTTGCTGCTTCTTTACTG CCCTACTTTCGGCACTGATAGGTAAAGACATCATCTCATTATTTGTAGTTTAGTGGAATAAGTTATGAAAGAGAACGTGA AATGTCATTGATCTTGCTGAAGAGATTGAAGGCTCAAGTTTCAGAAGTTAAAAGTATCATGTTATAGAACACTGACAAGG TACTGGATTGTTTAGGTGTATGAATTGGAATTTTTCCACTGATATTCAGTCATTTCTTTTCATTATGCATTATTATGTAA CATATAATCCATGTGCATCTTTATGATATATTCTCTTGAAATAAAGTATGAAATTGAGGGGAGGGGGATTTGGATGCTAT AAGGGTTGCTATGTTTGTCTGTGGGCTATTTATGATTGCAATTTTTTGGGTTAGGGCCAGGAATAGTTCAGAATCACTCA CTGTGTTCCTCCCACTTCAAGAAGTGATGATGTATCATACAATGTGAAAGAATACTTCTACACTTAATTTGCTTC 

CDS sequence (LotjaGi1g1v0105500.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGTTCAGCTAACACTAACATGCTGGTTTTCTTTCTTGTTCTTTACACATCTTCTATCTTTATCAGGGGTTATTTCAGT AACATTCACTTTAGTTAACAAATGCAACTACACCGTGTGGCCAGCTGCGACCACCACCACCAGCGGCGGAAACCTCTCAA CCACCGGCTTCGTCTTAAACTCCGGCGACTCCTCCACCGTCACGGTACCGTCTGACTGGAGCGGCCGATTCTGGGGCCGG ACTCTCTGCTCGACGGACCGCACCACCGGGAACTTCTCCTGCATCACCGGCGACTGCGGCACAGGGAAGGTCGCATGCGG CGGCAATTCAGGATCGCCGCCGGCCACGCTGGCGGAGTTCGGTTTGAACGGTGCCAACAACCGAGATTTCTTTGACGTCA GCTTGGTAGACGGTTACAACCTCCCTTTGGCGATTATTCCGTTGAGGGGGAACTGCAGCAGCTCCGGGTGCCGTGCGGAT CTGAACGCGAAGTGTCCGTCGGAGCTGAAGGTTACGGCGGAGCAAGCGGTGGTGGCGTGCCGGGGACCTTGCGCCGCGTT CAATTTGCAGGTTTTTTGCTGCGCCGGGAATTATTCGTCGCCGTCGAGTTGCGAGCCGAGTGTGTACGCCAACATTTTCA AGGAAGCGTGCCCGCAGGCGTATAGCTACGTCTACGATGACAGTACGAACACCACGTTTACTTGTGCTTCTGCCACAGAT TACAACATCACGTTTTGTCCTTCCCCTTCTTCCAATGACACCAGCTTGGGATCACTGGACCAAGGTGCGGCGAGTGTTGG CGTCTCATCCTCACTTACTGCTGGAAGTGAAACAACTCGGTGGCTTTCTCCATCAGGTGATTTTGCATTTGGATTTTATG AACTTCCAAATGAGCTTTTCTTGTTAGCTATATGGTATGACAGCATAACCAATGGGAGCATCGTTTGGTATGCAAATGGA GACAACCCTGCTCCTAAAGGATCAAGGTTGGAACTGAATGACTCCCAAGGGTTAGTGCTCACCAGCCCTCAAGGTTCAGA GCTATGGAGATCATATTTCAGATCTGGTACAGTTTCCAGTGGTCTAATGAATGATGCTGGGAATTTTCAGCTGAGAGACA AAGATTTTGTGGTATTATGGGATAGTTTCAGCAATCCTACTGATACATTGGTGCCTACTCAAGTTCTGGAGTTAAATGGC AATCTTTCTTCTCGACAAGGAGAGTTCAACTTCTCACGTGGACGGTTCAAACTTCGTCTACAACAGGATGGGAATCTTGT ATTCAACCTTATTAATTTGCCTAGCAACTACAATTATGAGCCTTACAATAGCACACGCACTGCTGATGCTAAAAATCAAA CAAATGCTGGCCAAAGTTTGATATTTGACAAATCAGGATTTTTGTACGTACTGAAGAATAGTGGTGAGAAGTTTTATATC ACTTATCCAAATGAGACAGTCTCAACTGATGGCTTCTATTACAAAGCAACACTCAATTATGATGGAGTTCTCACCATAGC ATATCACCCTAAAGATCCAAAAAACGGAACAAGCTGGGTTGTTGTTAAAACTAGACCAGAAAACATATGTTTGAATTCTA GATTCACGGAAGGTGAAGGTGTTTGTGGGTTTAATAGCATCTGTACCATTAAAGAAGACCAAAGGCCAATGTGTACCTGC CCAGATGGATATTCTCTAATTGATTCCAGTAACATGTATGGTGGTTGTATCCCAAATTTTCAAGTCATTTGTGAAGCCAG TGGGAAACGGGGTTCACAGGATGATCTATATACAATGATGGAATTGCCAAACACTGATTGGCCTAAATCTGATTATGAAA CATTAAGTCCTTCTACTCTACAAGAATGTAAGGAATCTTGTATGCAGGATTGCTCATGTGTGTTGGTTTCTTTCAACCAA AGCACCTGCTCGAAGAAGAAGCTCCCACTCTCATATGGGAGGAAAGATCAGGAAGTAGAAGGAGTTTCTGTCATGAAATT GATGAAAAATGATCCTCTTGCCTCCTTCCCCAATATGAAGAAAGATCATGATACTTTGATCATTGTGATATCCGTTCTGT TTGGCACCTCTGTTTTTGTCATTTTAATGTTGGTTGGATCAATATGTTTTGGGTTCCCTTACAGCCTCAAGAAAATCAAA AGAAGTAGAACCAAGACCAACAAAGGTTTCTTCGACAAAAATTTGCGCAATTTCACCTTCAAGGAAATTCAAGAAGCAAC AAGCAACTTCAGAGAAGAACTGGGAAGGGGATCTTGTGGCATTGTCTACAAAGGAGAGATAGGGATGACTGGTGTAGCTG TTAAGAAATTAGACAAGTTGTTCCAAGACAGTGATAAGGAATTCCAGACTGAAATGAATGTGATAGGCCAAACTCATCAC AGGAACCTCGTTCGCCTTCTTGGATATTGCAATGAGGGACAACACCGGATGCTGGTGTATGAGTTGATGAGCAATGGCAC CTTAGCAAGCTTCCTTTTCACCCCATTAAAACCAAACTGGAACCAAAGAGTACACATTGCCCTTGGGATTGCAAGAGGCC TTGTTTACTTGCATGAGGAATGTTGCACCCAAATCATCCATTGTGACATTAAGCCACAGAATATACTTCTAGATGATCAC CACAATGCCAGGATTTCAGATTTCGGGTTAGCAAAGCGGTTATTGATCAATCAAAGCCGCACTGAAACTGGAATTAGAGG AACCAAAGGGTATGTTGCACCAGATTGGTTTAGGAGTGCTCCGGTCACTGCTAAGGTTGATACTTATAGTTTTGGTGTAT TATTATTAGAGATCATTTGCTGTAGAAAAAATGTAGAAAAAGATCTTGTTGATGAAGAAAAGGGGATTTTAAGTGACTGG GCTTATGATTGCTACAGGTCTAAAAGATTAGACATTCTTCTAGAAAACGATAATGATGCTGCCATGGACACAAAGAGCTT CGAGAAGTTTGTCATGATTGCTATATGGTGCATTCAAGAAGATCCCTTTCTAAGGCCAACAATGAAGGAAGTTTTGCACA TGCTTGAAGGAATTGTTGAAGTTACAATTCCCCCAAGTCCCTACCTCTATGGTTCTGTTAGTTGCCATTGA 

Protein sequence (LotjaGi1g1v0105500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MVQLTLTCWFSFLFFTHLLSLSGVISVTFTLVNKCNYTVWPAATTTTSGGNLSTTGFVLNSGDSSTVTVPSDWSGRFWGR TLCSTDRTTGNFSCITGDCGTGKVACGGNSGSPPATLAEFGLNGANNRDFFDVSLVDGYNLPLAIIPLRGNCSSSGCRAD LNAKCPSELKVTAEQAVVACRGPCAAFNLQVFCCAGNYSSPSSCEPSVYANIFKEACPQAYSYVYDDSTNTTFTCASATD YNITFCPSPSSNDTSLGSLDQGAASVGVSSSLTAGSETTRWLSPSGDFAFGFYELPNELFLLAIWYDSITNGSIVWYANG DNPAPKGSRLELNDSQGLVLTSPQGSELWRSYFRSGTVSSGLMNDAGNFQLRDKDFVVLWDSFSNPTDTLVPTQVLELNG NLSSRQGEFNFSRGRFKLRLQQDGNLVFNLINLPSNYNYEPYNSTRTADAKNQTNAGQSLIFDKSGFLYVLKNSGEKFYI TYPNETVSTDGFYYKATLNYDGVLTIAYHPKDPKNGTSWVVVKTRPENICLNSRFTEGEGVCGFNSICTIKEDQRPMCTC PDGYSLIDSSNMYGGCIPNFQVICEASGKRGSQDDLYTMMELPNTDWPKSDYETLSPSTLQECKESCMQDCSCVLVSFNQ STCSKKKLPLSYGRKDQEVEGVSVMKLMKNDPLASFPNMKKDHDTLIIVISVLFGTSVFVILMLVGSICFGFPYSLKKIK RSRTKTNKGFFDKNLRNFTFKEIQEATSNFREELGRGSCGIVYKGEIGMTGVAVKKLDKLFQDSDKEFQTEMNVIGQTHH RNLVRLLGYCNEGQHRMLVYELMSNGTLASFLFTPLKPNWNQRVHIALGIARGLVYLHEECCTQIIHCDIKPQNILLDDH HNARISDFGLAKRLLINQSRTETGIRGTKGYVAPDWFRSAPVTAKVDTYSFGVLLLEIICCRKNVEKDLVDEEKGILSDW AYDCYRSKRLDILLENDNDAAMDTKSFEKFVMIAIWCIQEDPFLRPTMKEVLHMLEGIVEVTIPPSPYLYGSVSCH 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SignalP_EUK 1 20 20 -
Phobius 1 3 3 -
Phobius 1 20 20 -
Phobius 4 15 12 -
TMHMM 10 32 23 -
Phobius 16 20 5 -
Phobius 21 685 665 -
ProSiteProfiles 26 247 222 40.481
SUPERFAMILY 27 248 222 5.49E-73
Gene3D 27 247 221 3.8E-83
PRINTS 28 40 13 7.8E-14
CDD 28 246 219 1.30907E-105
SMART 29 247 219 1.3E-93
Pfam 33 247 215 6.4E-75
PRINTS 76 87 12 7.8E-14
ProSitePatterns 90 106 17 -
PRINTS 129 145 17 7.8E-14
PRINTS 237 246 10 7.8E-14
ProSiteProfiles 263 384 122 11.264
Gene3D 269 385 117 1.1E-7
SMART 271 386 116 4.1E-13
CDD 282 386 105 1.45749E-16
SUPERFAMILY 300 433 134 1.14E-17
Pfam 314 401 88 2.4E-11
Gene3D 386 514 129 9.4E-9
PANTHER 561 1027 467 3.8E-105
PANTHER 561 1027 467 3.8E-105
ProSiteProfiles 584 669 86 7.499
Pfam 598 639 42 2.4E-4
TMHMM 686 708 23 -
Phobius 686 716 31 -
Gene3D 713 822 110 6.9E-30
Phobius 717 1036 320 -
SUPERFAMILY 730 1016 287 2.97E-71
ProSiteProfiles 748 1029 282 34.859
SMART 748 1015 268 2.2E-30
Pfam 751 1013 263 2.6E-46
CDD 754 1018 265 2.19364E-83
Gene3D 823 1023 201 8.4E-54
ProSitePatterns 865 877 13 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.

Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0105500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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