Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0468400 |
| Transcript ID | LotjaGi1g1v0468400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine/threonine-protein kinase; TAIR: AT1G11330.2 S-locus lectin protein kinase family protein; Swiss-Prot: sp|Q9SXB8|Y1133_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330; TrEMBL-Plants: tr|A0A072TZ09|A0A072TZ09_MEDTR Serine/threonine-protein kinase; Found in the gene: LotjaGi1g1v0468400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:97887702..97891834) extracted from Lotus japonicus Gifu genome v1.2.
GAAGAATTATTTATTTAATGGTAGAGTGCATGACTTGAATATTGTGTTCTGGACTCTGGAGCAAGCTAGAAGTTTTCATT GCATCCCATAGGCAAACTTTTAGATGAAAGTCACAAATCTTACATTTGGATCATATTCCATAAATCCATTGATCTTCACC TTTTCATCTGAGAAATGGGTTTCAACAGCTGTGCAATTTTGTTCTCTATGCTGTCCATACAGTGTTGTTATTTGTTAAAT ATTGTTATTGCTATAGACACCATCACCTCATCTCAATTCATCAAGGATCCTGAAACTCTAAGCTCCAAAGATGGTAACTT CACCTTGGGGTTCTTTAGCCCTGGGAATTCCACATACCGCTACGTTGGAATTTGGTGGAAATCTCCATCCACAGTCATAT GGGTGGCTAACAGAAACCAACCACTGAATGATTCTTCTGGGGTTGTCACAATATCTGAAGATGGAAACCTTGTGGTATTG AATGGACACAAAACACTCATTTGGTCATCAAATGTTTCAAACACATCCAACAGAACTAGGTCCACGTTTTCAGGTTTTGG TAAACTTGTCCTTTTGGAAACCACAAAAGGAAACATCTTATGGCATAGTATACAGCATGCTTCAGACACAATACTACCAG GTATGAAACTTACAAGCAATGAAACAAGAAGAAGTGAGAAACATAAACTCACATCATGGAAAAGTCCTTCTGATCCTTCT TTTGGGAGCTTCTCTTCTTGGAGTGTCAATCGCCCATATATGCCTGAAGTGTTCATTTGGAAGGAAACAATACCATATTG GAGAAGTGGACCATGGAATGGAAGGGTCTTTACAGGGATACAAGGGATGGAATATGCATATGTTAATGGTTTTTATGGTG GAGATGATGGAGAAGGAAATATTGATATCTATTATATAACAAGAAATGAGTCGGAACCAGTGATCTATAATCTGAATTGG CAAGGCCAGTATCAAGCCAAATGTTGGGATGATGAGAAGGATGAAATGCGAATTTTATGGACTAGCCAAGAATCAGAGTG TGATGTGTATGGTACATGTGGGGCATTTGCAATCTGTAGTTCTCAAAGCTCACCAATATGCAGCTGTTTGAGAGGGTTTG AGCCCAAGAACAAAGAGGAGTGGAATAGTCAAAATTGGACTAGTGGGTGTGTTAGGAGGACAAGTTTGGAGTGTGATGGG GTCAACAATACTAAAACAAATGCTGATGGGTTTCTGAAATTGGAAATGGTTAAAGTACCAGATTCTGCAGGAGGGTCACC TGTTGAACCAGACTTATGCAGAAGCCAATGCTTGGAGAATTGCTCCTGCATTGCATATTCTCATGATGGTGGGATTGGCT GCATGTCTTGGAATGGAAATCTACTTGACATACAACAATTCTCAGAAGGAGGACTTGATCTATATGTTCGCGTAGCCTAC ACAGAACTTGGTACGCTAAGTGCTGTTTGTTCACTTACTTGATTTTATCTAATGTTTGTACATAAATTCTTGTATTAAAA ATTAAAAATTTCCCTATATAACAGATCATGGGACAAACACAACAATCATCATCACAGTTACAGTGACAGTAGGATCTATC ATAATTGTTGTTTTTGCCTATATTATGTGGAGAAGAAGGGCTTCTAATCATCCAGGTATTAAACTATCTTCCAGGATATA ATTTATAGCATGTTTCGATCAGTTTATTTTTCCTCAACCAATTCTGACACCGAAAAAACTCGCAGAAGCTTCTCCTTAGA ATTGATTTTTCCTTTAGAATTAATCGTAGCAGAATTTCAAAAAATGCAGGATTTTCAAACATGCCTAGAGAAGCTTGTTG ATTCTAAAGGCAAAATTAGTTCTAAAGAGAAGTTTATGTAGGTAGATTTTGAGTGCCATAATTGATACTGAAGAAAGAAA AGCTGCTCCAAACATATAATTATAATTAACCATTTTGTTGGTCCTCAAACTAAAGTTACATTGTATTTCTCTCTCCAGCT AAACTGTGGCACTGTTTTAGATCAACAAGGGGAAAGAACAACAAAGCTTTCCCTCTATTTAATGAAGTTGGAACATCTGA AGAATATAAAGATGACAACATAATTGAAGAATTGTCACAAGTTAATCCCAAGGAGCTAATACTATTTGATTTTGAAAAGG TTGCAATTGCCACAAACACCTTCCATTTTTCTAACAAACTTGGACAAGGTGGTTTTGGTCTGGTATACAAGGTACCTTAA ACACAACAGAGTTATCATATTTGAAGCCATTGTCTATAGTTGTTGTCTCTTAACATTTTCTTTCAGGGGAAACTGCAAGA TGGTCAAGAAATAGCAGTTAAAAGACTTTCTAGAGCATCTGGACAAGGGCTAGAAGAATTCAAGAATGAAGTAGTGGTAC TTTGTAAGCTTCAACACCGCAATCTTGTAAGACTTCTAGGTTGCTGCATTGGAGGTGGTGAAAAGATGTTGATATATGAG TACATGCCAAATAAAAGTTTGGATGCAAATATCTTTGGTTAGTTATTTGAAGCCCCCTTTAGCATTTGTCTCATATCCAA TTCCAAAATTTCATGTTTCTCTTTATTTTGCATTTATGATATGTTTAACAAATTACATCTAGTGAGCTTTCTTGAAAGCA TGCTCATAAGATGACTTAGCTTCATCTTCTTATATTATGTTCAAAATTTTGATATGCTACCCTTATCTTTTAGATCCATC CAAAAATAAAGCCTTAGATTGGAGGACACGATGTGGCATAATTGAAGGAGTAGCTCGAGGATTGCTTTATCTTCATAGAG ATTCAAGACTAAGAATCATACACAGAGATTTGAAGCCAAGTAATATCTTGTTAGATGAGGAGCTGAATCCAAAAATATCA GATTTTGGTATGGCTAGAATCTTTGGAAGGAGTGAAGATCAGGCCAATACAGGAAGAATTGTTGGAACTTAGTAAGTTTC CCTTTTATGTCCTATATTGTTCTAATATACCTGAAGAATAATTTGTTAACATTTCAATGCAGTGGTTACATGTCCCCTGA ATATGCAATGCAAGGACTGTTTTCAGAGAAATCAGATGTCTTCAGCTTTGGTGTTCTGATACTAGAGATTGTTAGTGGGA AAAGAAACTCAAGCTTTTATGACAACGAGCATGCTCTCAGCCTTTTAGGATTTGTAAGTCTCAACCATTCATTTCTAGCT CAAATGCGAGTAGCATGTTTGGATTAGCTTCTCTTTTCTCAGTATCAATTCCAACACATGAAGTTGTTCATAGAAGCTTC TCCCATAATTGAATTTGGAATCAATTTTATAATGATTTCCGAATATGTAAGAGCTCGTTTTCATATTGTTGATACAATTT CCAGATGTTTGACTTTTTATTTGATTTGATTTATTTATTTAGGCCTGGATACAATGGAGGGAAGGCAGTATCTCATCTTT AATAGATCCAAGCATGTATGATCCCAGTCATCAGAAGTCTATTATAAGGTGCCTACATATAGGGCTTCTGTGTGTGCAAG AACATGCTGTGGACAGACCAACTATGGCTACAGTGATTTCTATGCTTAATAGTGATGTTGAAATTCTTCCTCCTCCAAGT CAACCAGCATTCATCTTGAGGAAGAACATGTTGAGTTCAGTGTCATATGAAGAAAGGCATGAAGTATCTTCCATCAATAC AATCAGCTTGACTGACATCTATGCTAGATAGTGTCCACTTTGATCCTTGCTTGTGTATTTTCTGATGTATCCAATTTAAC AAAGATCAATTGTTAGTGTTCATTCTTCTTAGTAGACTAGAGGGTAATAATGGCTTACACATGGTGCTTTAAAGTGTGCA AGAAGAGCTTGTAATAGATAGACAACTCGATCTGGCCTGGCACTTGTGACTTTGTAAATCTTCATTGTCCAAGGCAGTGT GATTTAGCAGAGCTGTCAATGTTTAATGCATTGTCCTCTGAAAATAGTAAGAATAAGCTTCAACAATAATGTCACTCATT GTCACTATATCTAGAACATAAGCTCCATAAATAATGAATTTAGTCACCTATAAGCCCTATTAACTGACTGCCCAACACAA ACTACAATTCTTAAATTCCAACATTGTTGTTTTTTCTAGCAATTATATGGCGA
CDS sequence (LotjaGi1g1v0468400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTTTCAACAGCTGTGCAATTTTGTTCTCTATGCTGTCCATACAGTGTTGTTATTTGTTAAATATTGTTATTGCTAT AGACACCATCACCTCATCTCAATTCATCAAGGATCCTGAAACTCTAAGCTCCAAAGATGGTAACTTCACCTTGGGGTTCT TTAGCCCTGGGAATTCCACATACCGCTACGTTGGAATTTGGTGGAAATCTCCATCCACAGTCATATGGGTGGCTAACAGA AACCAACCACTGAATGATTCTTCTGGGGTTGTCACAATATCTGAAGATGGAAACCTTGTGGTATTGAATGGACACAAAAC ACTCATTTGGTCATCAAATGTTTCAAACACATCCAACAGAACTAGGTCCACGTTTTCAGGTTTTGGTAAACTTGTCCTTT TGGAAACCACAAAAGGAAACATCTTATGGCATAGTATACAGCATGCTTCAGACACAATACTACCAGGTATGAAACTTACA AGCAATGAAACAAGAAGAAGTGAGAAACATAAACTCACATCATGGAAAAGTCCTTCTGATCCTTCTTTTGGGAGCTTCTC TTCTTGGAGTGTCAATCGCCCATATATGCCTGAAGTGTTCATTTGGAAGGAAACAATACCATATTGGAGAAGTGGACCAT GGAATGGAAGGGTCTTTACAGGGATACAAGGGATGGAATATGCATATGTTAATGGTTTTTATGGTGGAGATGATGGAGAA GGAAATATTGATATCTATTATATAACAAGAAATGAGTCGGAACCAGTGATCTATAATCTGAATTGGCAAGGCCAGTATCA AGCCAAATGTTGGGATGATGAGAAGGATGAAATGCGAATTTTATGGACTAGCCAAGAATCAGAGTGTGATGTGTATGGTA CATGTGGGGCATTTGCAATCTGTAGTTCTCAAAGCTCACCAATATGCAGCTGTTTGAGAGGGTTTGAGCCCAAGAACAAA GAGGAGTGGAATAGTCAAAATTGGACTAGTGGGTGTGTTAGGAGGACAAGTTTGGAGTGTGATGGGGTCAACAATACTAA AACAAATGCTGATGGGTTTCTGAAATTGGAAATGGTTAAAGTACCAGATTCTGCAGGAGGGTCACCTGTTGAACCAGACT TATGCAGAAGCCAATGCTTGGAGAATTGCTCCTGCATTGCATATTCTCATGATGGTGGGATTGGCTGCATGTCTTGGAAT GGAAATCTACTTGACATACAACAATTCTCAGAAGGAGGACTTGATCTATATGTTCGCGTAGCCTACACAGAACTTGATCA TGGGACAAACACAACAATCATCATCACAGTTACAGTGACAGTAGGATCTATCATAATTGTTGTTTTTGCCTATATTATGT GGAGAAGAAGGGCTTCTAATCATCCAGCTAAACTGTGGCACTGTTTTAGATCAACAAGGGGAAAGAACAACAAAGCTTTC CCTCTATTTAATGAAGTTGGAACATCTGAAGAATATAAAGATGACAACATAATTGAAGAATTGTCACAAGTTAATCCCAA GGAGCTAATACTATTTGATTTTGAAAAGGTTGCAATTGCCACAAACACCTTCCATTTTTCTAACAAACTTGGACAAGGTG GTTTTGGTCTGGTATACAAGGGGAAACTGCAAGATGGTCAAGAAATAGCAGTTAAAAGACTTTCTAGAGCATCTGGACAA GGGCTAGAAGAATTCAAGAATGAAGTAGTGGTACTTTGTAAGCTTCAACACCGCAATCTTGTAAGACTTCTAGGTTGCTG CATTGGAGGTGGTGAAAAGATGTTGATATATGAGTACATGCCAAATAAAAGTTTGGATGCAAATATCTTTGATCCATCCA AAAATAAAGCCTTAGATTGGAGGACACGATGTGGCATAATTGAAGGAGTAGCTCGAGGATTGCTTTATCTTCATAGAGAT TCAAGACTAAGAATCATACACAGAGATTTGAAGCCAAGTAATATCTTGTTAGATGAGGAGCTGAATCCAAAAATATCAGA TTTTGGTATGGCTAGAATCTTTGGAAGGAGTGAAGATCAGGCCAATACAGGAAGAATTGTTGGAACTTATGGTTACATGT CCCCTGAATATGCAATGCAAGGACTGTTTTCAGAGAAATCAGATGTCTTCAGCTTTGGTGTTCTGATACTAGAGATTGTT AGTGGGAAAAGAAACTCAAGCTTTTATGACAACGAGCATGCTCTCAGCCTTTTAGGATTTGCCTGGATACAATGGAGGGA AGGCAGTATCTCATCTTTAATAGATCCAAGCATGTATGATCCCAGTCATCAGAAGTCTATTATAAGGTGCCTACATATAG GGCTTCTGTGTGTGCAAGAACATGCTGTGGACAGACCAACTATGGCTACAGTGATTTCTATGCTTAATAGTGATGTTGAA ATTCTTCCTCCTCCAAGTCAACCAGCATTCATCTTGAGGAAGAACATGTTGAGTTCAGTGTCATATGAAGAAAGGCATGA AGTATCTTCCATCAATACAATCAGCTTGACTGACATCTATGCTAGATAG
Protein sequence (LotjaGi1g1v0468400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGFNSCAILFSMLSIQCCYLLNIVIAIDTITSSQFIKDPETLSSKDGNFTLGFFSPGNSTYRYVGIWWKSPSTVIWVANR NQPLNDSSGVVTISEDGNLVVLNGHKTLIWSSNVSNTSNRTRSTFSGFGKLVLLETTKGNILWHSIQHASDTILPGMKLT SNETRRSEKHKLTSWKSPSDPSFGSFSSWSVNRPYMPEVFIWKETIPYWRSGPWNGRVFTGIQGMEYAYVNGFYGGDDGE GNIDIYYITRNESEPVIYNLNWQGQYQAKCWDDEKDEMRILWTSQESECDVYGTCGAFAICSSQSSPICSCLRGFEPKNK EEWNSQNWTSGCVRRTSLECDGVNNTKTNADGFLKLEMVKVPDSAGGSPVEPDLCRSQCLENCSCIAYSHDGGIGCMSWN GNLLDIQQFSEGGLDLYVRVAYTELDHGTNTTIIITVTVTVGSIIIVVFAYIMWRRRASNHPAKLWHCFRSTRGKNNKAF PLFNEVGTSEEYKDDNIIEELSQVNPKELILFDFEKVAIATNTFHFSNKLGQGGFGLVYKGKLQDGQEIAVKRLSRASGQ GLEEFKNEVVVLCKLQHRNLVRLLGCCIGGGEKMLIYEYMPNKSLDANIFDPSKNKALDWRTRCGIIEGVARGLLYLHRD SRLRIIHRDLKPSNILLDEELNPKISDFGMARIFGRSEDQANTGRIVGTYGYMSPEYAMQGLFSEKSDVFSFGVLILEIV SGKRNSSFYDNEHALSLLGFAWIQWREGSISSLIDPSMYDPSHQKSIIRCLHIGLLCVQEHAVDRPTMATVISMLNSDVE ILPPPSQPAFILRKNMLSSVSYEERHEVSSINTISLTDIYAR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 26 | 26 | - | – | |
| Phobius | 1 | 5 | 5 | - | – | |
| PIRSF | 2 | 842 | 841 | 2.0E-266 | ||
| TMHMM | 5 | 27 | 23 | - | – | |
| Phobius | 6 | 21 | 16 | - | – | |
| Phobius | 22 | 26 | 5 | - | – | |
| PANTHER | 25 | 439 | 415 | 4.4E-169 | – | |
| PANTHER | 25 | 439 | 415 | 4.4E-169 | – | |
| Gene3D | 27 | 148 | 122 | 1.7E-17 | ||
| ProSiteProfiles | 27 | 146 | 120 | 17.952 | ||
| Phobius | 27 | 432 | 406 | - | – | |
| CDD | 33 | 145 | 113 | 4.60305E-25 | ||
| SMART | 33 | 149 | 117 | 1.2E-23 | ||
| SUPERFAMILY | 64 | 181 | 118 | 1.31E-22 | ||
| Pfam | 73 | 176 | 104 | 8.0E-29 | ||
| Pfam | 209 | 319 | 111 | 1.9E-25 | ||
| CDD | 336 | 421 | 86 | 9.04727E-23 | – | |
| ProSiteProfiles | 340 | 421 | 82 | 8.428 | ||
| SMART | 348 | 420 | 73 | 1.4E-7 | ||
| Pfam | 348 | 406 | 59 | 4.0E-15 | ||
| TMHMM | 432 | 454 | 23 | - | – | |
| Phobius | 433 | 454 | 22 | - | – | |
| Phobius | 455 | 842 | 388 | - | – | |
| Gene3D | 485 | 599 | 115 | 1.7E-35 | – | |
| SUPERFAMILY | 509 | 833 | 325 | 1.75E-82 | ||
| ProSiteProfiles | 524 | 810 | 287 | 37.432 | ||
| SMART | 524 | 829 | 306 | 1.7E-31 | ||
| Pfam | 525 | 794 | 270 | 1.3E-45 | ||
| ProSitePatterns | 530 | 552 | 23 | - | ||
| CDD | 530 | 796 | 267 | 1.48936E-91 | – | |
| Gene3D | 600 | 801 | 202 | 6.8E-58 | – | |
| ProSitePatterns | 645 | 657 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein serine/threonine kinase activity | Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. | ||
| Biological process | Recognition of pollen | The process, involving the sharing and interaction of the single locus incompatibility haplotypes, involved in the recognition or rejection of the self pollen by cells in the stigma. This process ensures out-breeding in certain plant species. |
Expression pattern of LotjaGi1g1v0468400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…