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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR011009
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 3629 results. Now displaying 6 of 73 with 50 rows per page. This search has taken 6.280s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0243349.1
n.a. PREDICTED: protein NSP-INTERACTING KINASE 3-like [Glycine max] gi|356497611|ref|XP_003517653.1| chr0 126210556 126215918 -
2 domain predictions
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Lj0g3v0244309.1
n.a. PREDICTED: receptor-like protein kinase HSL1-like [Glycine max] gi|356515144|ref|XP_003526261.1| chr0 126783691 126786749 +
2 domain predictions
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Lj0g3v0244319.1
n.a. HAESA-like 1 isoform 2 [Theobroma cacao] gi|508707636|gb|EOX99532.1| chr0 126783691 126785998 +
2 domain predictions
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Lj0g3v0245009.1
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 6-like [Glycine max] gi|356529332|ref|XP_003533249.1| chr0 127034652 127039161 +
2 domain predictions
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Lj0g3v0245699.1
n.a. PREDICTED: protein kinase G11A-like isoform X1 [Cicer arietinum] gi|502173556|ref|XP_004515357.1| chr0 127384070 127387446 -
2 domain predictions
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Lj0g3v0246639.1
n.a. PREDICTED: serine/threonine-protein kinase BCK1/SLK1/SSP31-like isoform X2 [Cicer arietinum] gi|502160938|ref|XP_004511962.1| chr0 127840056 127844916 +
2 domain predictions
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Lj0g3v0248219.1
n.a. octicosapeptide/Phox/Bem1p domain-containing protein kinase [Arabidopsis thaliana] gi|186510389|ref|NP_189115.3| chr0 128679950 128683973 +
2 domain predictions
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Lj0g3v0248469.1
n.a. PREDICTED: proline-rich receptor-like protein kinase PERK8-like isoform X1 [Cicer arietinum] gi|502144970|ref|XP_004505816.1| chr0 128790814 128795096 -
2 domain predictions
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Lj0g3v0248469.2
n.a. PREDICTED: proline-rich receptor-like protein kinase PERK8-like isoform X1 [Cicer arietinum] gi|502144970|ref|XP_004505816.1| chr0 128790814 128795624 -
2 domain predictions
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Lj0g3v0249939.1
n.a. Kinase-like protein [Medicago truncatula] gi|357454055|ref|XP_003597308.1| chr0 129568127 129572119 -
2 domain predictions
 –
Lj0g3v0250139.1
n.a. PREDICTED: serine/threonine-protein kinase ATG1-like [Cicer arietinum] gi|502177853|ref|XP_004516130.1| chr0 129653521 129661959 +
2 domain predictions
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Lj0g3v0250199.1
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 29-like [Glycine max] gi|356574368|ref|XP_003555320.1| chr0 129693879 129697385 +
2 domain predictions
 –
Lj0g3v0250989.1
n.a. PREDICTED: serine/threonine-protein kinase Nek5-like isoform X1 [Cicer arietinum] gi|502165636|ref|XP_004513642.1| chr0 130130959 130146566 +
2 domain predictions
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Lj0g3v0251409.1
n.a. kinase family protein [Arabidopsis lyrata subsp]. lyrata] gi|297848354|ref|XP_002892058.1| chr0 130410527 130413416 -
2 domain predictions
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Lj0g3v0251489.1
n.a. Casein kinase I protein [Theobroma cacao] gi|508782527|gb|EOY29783.1| chr0 130450827 130456844 +
2 domain predictions
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Lj0g3v0252549.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-2-like [Cicer arietinum] gi|502157130|ref|XP_004510769.1| chr0 130962861 130966414 +
2 domain predictions
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Lj0g3v0252559.1
n.a. stress-induced receptor-like kinase precursor [Glycine max] gi|351725323|ref|NP_001238112.1| chr0 130972525 130987837 -
2 domain predictions
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Lj0g3v0255569.1
n.a. PREDICTED: protein-ribulosamine 3-kinase, chloroplastic-like isoform X1 [Cicer arietinum] gi|502157440|ref|XP_004510878.1| chr0 132758048 132759948 -
2 domain predictions
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Lj0g3v0255569.2
n.a. PREDICTED: protein-ribulosamine 3-kinase, chloroplastic-like isoform X1 [Cicer arietinum] gi|502157440|ref|XP_004510878.1| chr0 132758048 132764125 -
2 domain predictions
 –
Lj0g3v0255899.1
n.a. protein kinase family protein [Glycine max] gi|351724465|ref|NP_001235011.1| chr0 132886409 132888985 +
2 domain predictions
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Lj0g3v0255909.1
n.a. PREDICTED: probable receptor-like protein kinase At2g23200-like [Cicer arietinum] gi|502152796|ref|XP_004509098.1| chr0 132889208 132890885 -
2 domain predictions
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Lj0g3v0257389.1
n.a. PREDICTED: probable serine/threonine-protein kinase Cx32, chloroplastic-like [Glycine max] gi|356529677|ref|XP_003533415.1| chr0 133590151 133594622 +
2 domain predictions
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Lj0g3v0257449.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300-like [Cicer arietinum] gi|502124903|ref|XP_004498719.1| chr0 133648660 133651802 -
2 domain predictions
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Lj0g3v0257499.1
n.a. PREDICTED: probable receptor protein kinase TMK1-like [Glycine max] gi|356521171|ref|XP_003529231.1| chr0 133666414 133670992 -
2 domain predictions
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Lj0g3v0257879.1
n.a. PREDICTED: probable receptor-like protein kinase At5g39030-like isoform X2 [Cicer arietinum] gi|502123882|ref|XP_004498297.1| chr0 133904277 133909875 +
2 domain predictions
 –
Lj0g3v0257909.1
n.a. Kinase R-like protein [Medicago truncatula] gi|357438749|ref|XP_003589651.1| chr0 133912690 133915391 -
2 domain predictions
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Lj0g3v0257919.2
n.a. PREDICTED: probable receptor-like protein kinase At1g67000-like [Cicer arietinum] gi|502123870|ref|XP_004498292.1| chr0 133912738 133915391 -
2 domain predictions
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Lj0g3v0258029.1
n.a. protein kinase-related protein precursor [Glycine max] gi|351725755|ref|NP_001235056.1| chr0 133943762 133945170 +
2 domain predictions
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Lj0g3v0258799.1
n.a. PREDICTED: serine/threonine-protein kinase GRIK1-like isoform X1 [Cicer arietinum] gi|502082303|ref|XP_004487125.1| chr0 134364458 134370301 +
2 domain predictions
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Lj0g3v0259209.1
n.a. FERONIA receptor-like kinase [Glycine max] gi|351724969|ref|NP_001237588.1| chr0 134690484 134692543 +
2 domain predictions
 –
Lj0g3v0259229.1
n.a. protein kinase APK1A, chloroplastic-like [Glycine max] gi|359807309|ref|NP_001240863.1| chr0 134707127 134710049 +
2 domain predictions
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Lj0g3v0259229.2
n.a. protein kinase APK1A, chloroplastic-like [Glycine max] gi|359807309|ref|NP_001240863.1| chr0 134707127 134710049 +
2 domain predictions
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Lj0g3v0259619.1
n.a. PREDICTED: serine/threonine-protein kinase SAPK2-like [Glycine max] gi|356512678|ref|XP_003525044.1| chr0 134927443 134931457 -
2 domain predictions
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Lj0g3v0262369.1
n.a. PREDICTED: serine/threonine-protein kinase PBS1-like isoform X1 [Cicer arietinum] gi|502121751|ref|XP_004497429.1| chr0 135981117 135986723 -
2 domain predictions
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Lj0g3v0262369.2
n.a. PREDICTED: serine/threonine-protein kinase PBS1-like isoform X1 [Cicer arietinum] gi|502121751|ref|XP_004497429.1| chr0 135981117 135986723 -
2 domain predictions
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Lj0g3v0264469.1
n.a. PREDICTED: probable receptor-like protein kinase At1g67000-like [Cicer arietinum] gi|502124351|ref|XP_004498489.1| chr0 137093886 137096143 +
2 domain predictions
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Lj0g3v0264479.1
n.a. PREDICTED: probable receptor-like protein kinase At5g39020-like [Cicer arietinum] gi|502124239|ref|XP_004498441.1| chr0 137103541 137104203 -
2 domain predictions
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Lj0g3v0266219.1
n.a. PREDICTED: proline-rich receptor-like protein kinase PERK13-like [Glycine max] gi|356544902|ref|XP_003540886.1| chr0 137845649 137849499 -
2 domain predictions
 –
Lj0g3v0266899.1
n.a. PREDICTED: probable leucine-rich repeat receptor-like protein kinase At2g33170-like [Cicer arietinum] gi|502166974|ref|XP_004514026.1| chr0 138286275 138293398 +
2 domain predictions
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Lj0g3v0266969.1
n.a. Receptor-like kinase [Medicago truncatula] gi|357501755|ref|XP_003621166.1| chr0 138344724 138346275 -
2 domain predictions
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Lj0g3v0267379.1
n.a. PREDICTED: CBL-interacting serine/threonine-protein kinase 1-like [Cicer arietinum] gi|502086342|ref|XP_004488187.1| chr0 138530473 138536689 -
2 domain predictions
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Lj0g3v0268469.1
n.a. Serine/threonine-protein kinase cx32 isoform 2 [Theobroma cacao] gi|508706993|gb|EOX98889.1| chr0 138974474 138978789 +
2 domain predictions
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Lj0g3v0268469.2
n.a. protein kinase [Glycine max] gi|351726644|ref|NP_001235086.1| chr0 138974609 138976523 +
2 domain predictions
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Lj0g3v0268479.1
n.a. n.a. chr0 138975478 138978420 -
2 domain predictions
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Lj0g3v0268579.1
n.a. PREDICTED: serine/threonine-protein kinase PBS1-like [Glycine max] gi|356499386|ref|XP_003518522.1| chr0 139045191 139047769 +
2 domain predictions
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Lj0g3v0268659.1
n.a. Dual specificity protein kinase pyk2 [Medicago truncatula] gi|357478457|ref|XP_003609514.1| chr0 139103742 139111675 -
2 domain predictions
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Lj0g3v0269359.1
n.a. PREDICTED: serine/threonine-protein kinase SRK2I-like isoform 1 [Glycine max] gi|356563656|ref|XP_003550077.1| chr0 139555603 139560409 +
2 domain predictions
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Lj0g3v0271689.1
n.a. PREDICTED: mitogen-activated protein kinase 10-like [Glycine max] gi|356567418|ref|XP_003551917.1| chr0 140778661 140784928 +
2 domain predictions
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Lj0g3v0272349.1
n.a. Protein kinase 2B [Medicago truncatula] gi|357477519|ref|XP_003609045.1| chr0 141118608 141123310 +
2 domain predictions
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Lj0g3v0272349.2
n.a. Protein kinase 2B [Medicago truncatula] gi|357477519|ref|XP_003609045.1| chr0 141118608 141123310 +
2 domain predictions
 –