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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0257499 |
| Transcript ID | Lj0g3v0257499.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable receptor protein kinase TMK1-like [Glycine max] gi|356521171|ref|XP_003529231.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 28 | 28 | – | – | |
| Phobius | 1 | 28 | 28 | – | – | |
| SignalP | 1 | 28 | 28 | – | – | |
| Phobius | 1 | 4 | 4 | – | – | |
| TMHMM | 5 | 24 | 20 | – | – | |
| Phobius | 5 | 23 | 19 | – | – | |
| PANTHER | 9 | 122 | 114 | 0 | – | |
| PANTHER | 9 | 122 | 114 | 0 | – | |
| Phobius | 24 | 28 | 5 | – | – | |
| Phobius | 29 | 473 | 445 | – | – | |
| Pfam | 29 | 63 | 35 | 0.0035 | ||
| Gene3D | 31 | 305 | 275 | 9.70E-46 | ||
| SUPERFAMILY | 39 | 305 | 267 | 3.06E-38 | ||
| PANTHER | 226 | 318 | 93 | 0 | – | |
| PANTHER | 226 | 318 | 93 | 0 | – | |
| Gene3D | 335 | 437 | 103 | 1.00E-17 | ||
| Pfam | 346 | 368 | 23 | 1.7 | ||
| SUPERFAMILY | 370 | 438 | 69 | 3.06E-38 | ||
| PANTHER | 430 | 522 | 93 | 0 | – | |
| PANTHER | 430 | 522 | 93 | 0 | – | |
| MobiDBLite | 446 | 469 | 24 | – | – | |
| Gene3D | 457 | 510 | 54 | 7.20E-09 | ||
| Phobius | 474 | 497 | 24 | – | – | |
| TMHMM | 475 | 497 | 23 | – | – | |
| Phobius | 498 | 928 | 431 | – | – | |
| Gene3D | 548 | 587 | 40 | 7.20E-09 | ||
| SUPERFAMILY | 553 | 849 | 297 | 7.28E-81 | ||
| PANTHER | 558 | 883 | 326 | 0 | – | |
| PANTHER | 558 | 883 | 326 | 0 | – | |
| SMART | 574 | 854 | 281 | 3.40E-49 | ||
| ProSiteProfiles | 574 | 854 | 281 | 40.923 | ||
| Pfam | 575 | 848 | 274 | 5.00E-49 | ||
| ProSitePatterns | 580 | 602 | 23 | – | ||
| CDD | 580 | 847 | 268 | 6.48E-96 | – | |
| Gene3D | 588 | 640 | 53 | 1.70E-24 | – | |
| Gene3D | 641 | 848 | 208 | 6.10E-44 | – | |
| ProSitePatterns | 699 | 711 | 13 | – | ||
| MobiDBLite | 895 | 928 | 34 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj0g3v0257499.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0257499.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.