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Lj0g3v0244319.1

Overview

Field Value
Gene ID Lj0g3v0244319
Transcript ID Lj0g3v0244319.1
Lotus japonicus genome version MG20 v3.0
Description HAESA-like 1 isoform 2 [Theobroma cacao] gi|508707636|gb|EOX99532.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 382 382
Gene3D 6 151 146 8.80E-30
ProSiteProfiles 6 27 22 4.632
PANTHER 9 609 601 0
PANTHER 9 609 601 0
SUPERFAMILY 11 367 357 3.16E-57
ProSiteProfiles 41 62 22 4.793
ProSiteProfiles 89 111 23 4.893
ProSiteProfiles 113 135 23 4.886
Pfam 138 196 59 1.90E-06
Gene3D 152 367 216 7.90E-55
ProSiteProfiles 185 207 23 4.508
ProSiteProfiles 209 230 22 4.87
ProSiteProfiles 281 304 24 6.526
ProSiteProfiles 305 327 23 5.956
ProSiteProfiles 328 350 23 7.327
Phobius 383 405 23
TMHMM 383 405 23
Phobius 406 605 200
SUPERFAMILY 439 612 174 1.27E-54
ProSiteProfiles 439 634 196 30.181
SMART 439 633 195 4.00E-11
Pfam 441 609 169 2.20E-33
ProSitePatterns 445 468 24
Gene3D 445 500 56 3.00E-21
Gene3D 501 609 109 1.30E-28
ProSitePatterns 558 570 13
TMHMM 599 621 23
Phobius 606 629 24
Phobius 630 634 5

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.

LORE1 insertions 5

Expression data

Expression pattern

Expression pattern of Lj0g3v0244319.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0244319.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.