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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR032675
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 2134 results. Now displaying 3 of 43 with 50 rows per page. This search has taken 7.270s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0101439.3
n.a. TMV resistance protein N [Medicago truncatula] gi|357509247|ref|XP_003624912.1| chr0 43038093 43048258 -
3 domain predictions
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Lj0g3v0103619.1
n.a. PREDICTED: TMV resistance protein N-like, partial [Glycine max] gi|356560717|ref|XP_003548635.1| chr0 44190257 44198052 +
3 domain predictions
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Lj0g3v0106439.1
n.a. PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770-like [Glycine max] gi|356559110|ref|XP_003547844.1| chr0 45774831 45781977 -
3 domain predictions
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Lj0g3v0107419.1
n.a. NBS-LRR type disease resistance protein [Medicago truncatula] gi|357458569|ref|XP_003599565.1| chr0 46339939 46341109 -
3 domain predictions
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Lj0g3v0107589.1
n.a. F-box/FBD/LRR-repeat protein [Medicago truncatula] gi|357510183|ref|XP_003625380.1| chr0 46404926 46406006 -
2 domain predictions
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Lj0g3v0108759.1
n.a. Kinase-like protein [Medicago truncatula] gi|357521441|ref|XP_003631009.1| chr0 47065607 47067858 +
3 domain predictions
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Lj0g3v0111159.1
n.a. PREDICTED: probable disease resistance protein At5g66900-like [Glycine max] gi|356565670|ref|XP_003551061.1| chr0 48256335 48257075 +
2 domain predictions
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Lj0g3v0111179.1
n.a. PREDICTED: probable disease resistance protein At5g66900-like [Glycine max] gi|356565670|ref|XP_003551061.1| chr0 48260570 48265417 -
2 domain predictions
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Lj0g3v0113409.1
n.a. PREDICTED: F-box/FBD/LRR-repeat protein At4g26340-like [Glycine max] gi|356527370|ref|XP_003532284.1| chr0 49547357 49549211 -
2 domain predictions
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Lj0g3v0114149.2
n.a. Disease resistance protein [Medicago truncatula] gi|357499833|ref|XP_003620205.1| chr0 49966306 49969873 +
2 domain predictions
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Lj0g3v0114409.1
n.a. PREDICTED: disease resistance protein RGA2-like [Glycine max] gi|356570480|ref|XP_003553414.1| chr0 50167971 50170933 +
3 domain predictions
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Lj0g3v0114919.1
n.a. PREDICTED: receptor-like protein 12-like [Glycine max] gi|356503054|ref|XP_003520327.1| chr0 50450689 50453761 +
3 domain predictions
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Lj0g3v0115399.1
n.a. NBS resistance protein [Medicago truncatula] gi|357513713|ref|XP_003627145.1| chr0 50725473 50727430 -
3 domain predictions
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Lj0g3v0115709.1
n.a. PREDICTED: probable inactive receptor kinase At5g58300-like [Glycine max] gi|356537708|ref|XP_003537367.1| chr0 50859370 50863385 +
3 domain predictions
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Lj0g3v0116329.1
n.a. PREDICTED: receptor-like protein 12-like [Glycine max] gi|356561434|ref|XP_003548986.1| chr0 51162485 51165361 -
3 domain predictions
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Lj0g3v0117959.1
n.a. F-box/LRR-repeat protein [Medicago truncatula] gi|357492365|ref|XP_003616471.1| chr0 52136232 52137631 +
2 domain predictions
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Lj0g3v0120479.1
n.a. PREDICTED: F-box/FBD/LRR-repeat protein At4g26340-like [Glycine max] gi|356527370|ref|XP_003532284.1| chr0 53520885 53523044 -
2 domain predictions
 –
Lj0g3v0120599.1
n.a. F-box/FBD/LRR-repeat protein [Medicago truncatula] gi|357488451|ref|XP_003614513.1| chr0 53568013 53570569 -
2 domain predictions
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Lj0g3v0120609.1
n.a. PREDICTED: F-box/FBD/LRR-repeat protein At4g26340-like [Glycine max] gi|356527370|ref|XP_003532284.1| chr0 53570674 53571444 -
2 domain predictions
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Lj0g3v0120619.2
n.a. PREDICTED: F-box/FBD/LRR-repeat protein At4g26340-like [Glycine max] gi|356527370|ref|XP_003532284.1| chr0 53574469 53576238 -
2 domain predictions
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Lj0g3v0120629.1
n.a. PREDICTED: FBD-associated F-box protein At5g56370-like [Cicer arietinum] gi|502076975|ref|XP_004485511.1| chr0 53577854 53579964 -
2 domain predictions
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Lj0g3v0121729.1
n.a. F-box/LRR-repeat protein [Medicago truncatula] gi|357466215|ref|XP_003603392.1| chr0 54341448 54343319 +
2 domain predictions
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Lj0g3v0122739.1
n.a. F-box/LRR-repeat protein [Medicago truncatula] gi|357488837|ref|XP_003614706.1| chr0 54877576 54880836 -
2 domain predictions
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Lj0g3v0127529.1
n.a. NBS resistance protein [Medicago truncatula] gi|357472003|ref|XP_003606286.1| chr0 57516008 57518584 -
3 domain predictions
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Lj0g3v0127549.1
n.a. PREDICTED: F-box/LRR-repeat protein 4-like [Cicer arietinum] gi|502166912|ref|XP_004514011.1| chr0 57531772 57533693 +
2 domain predictions
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Lj0g3v0128389.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1-like [Cicer arietinum] gi|502165747|ref|XP_004513677.1| chr0 57989311 57990418 +
3 domain predictions
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Lj0g3v0128559.1
n.a. PREDICTED: FBD-associated F-box protein At3g49020-like [Cicer arietinum] gi|502087930|ref|XP_004488685.1| chr0 58074693 58077725 -
2 domain predictions
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Lj0g3v0128699.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356515308|ref|XP_003526343.1| chr0 58173504 58176808 -
3 domain predictions
 –
Lj0g3v0128709.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356515308|ref|XP_003526343.1| chr0 58173756 58179791 -
3 domain predictions
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Lj0g3v0132469.2
n.a. n.a. chr0 60457324 60461356 -
3 domain predictions
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Lj0g3v0132889.1
n.a. NB-LRR type disease resistance protein Rps1-k-2 [Medicago truncatula] gi|357457003|ref|XP_003598782.1| chr0 60680533 60685360 +
3 domain predictions
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Lj0g3v0133229.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356561802|ref|XP_003549167.1| chr0 60912920 60921656 +
3 domain predictions
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Lj0g3v0134589.2
n.a. ERECTA-like kinase [Glycine max] gi|351726293|ref|NP_001235330.1| chr0 61750638 61755854 +
2 domain predictions
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Lj0g3v0134889.1
n.a. Receptor-like kinase [Medicago truncatula] gi|357493297|ref|XP_003616937.1| chr0 61907973 61912446 +
3 domain predictions
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Lj0g3v0157099.1
n.a. Cc-nbs-lrr resistance protein [Medicago truncatula] gi|357493209|ref|XP_003616893.1| chr0 73573193 73573624 +
2 domain predictions
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Lj0g3v0160349.1
n.a. Disease resistance protein [Medicago truncatula] gi|357513659|ref|XP_003627118.1| chr0 75265475 75265741 -
2 domain predictions
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Lj0g3v0161519.1
n.a. PREDICTED: probable inactive receptor kinase At1g48480-like [Glycine max] gi|356499089|ref|XP_003518376.1| chr0 75992903 75996790 -
3 domain predictions
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Lj0g3v0162109.1
n.a. PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g68400-like [Cicer arietinum] gi|502180487|ref|XP_004516649.1| chr0 76398426 76402109 +
3 domain predictions
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Lj0g3v0162299.1
n.a. leucine-rich repeat family protein [Solanum lycopersicum] gi|111183161|gb|ABH07898.1| chr0 76516342 76517680 +
3 domain predictions
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Lj0g3v0164339.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356497814|ref|XP_003517752.1| chr0 77834077 77837104 -
3 domain predictions
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Lj0g3v0167089.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2-like [Glycine max] gi|356561456|ref|XP_003548997.1| chr0 79429669 79434308 +
3 domain predictions
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Lj0g3v0168689.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356573485|ref|XP_003554889.1| chr0 80552560 80554280 -
3 domain predictions
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Lj0g3v0171449.1
n.a. F-box/LRR-repeat protein [Medicago truncatula] gi|357488837|ref|XP_003614706.1| chr0 82196476 82197961 -
2 domain predictions
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Lj0g3v0172529.1
n.a. PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840-like [Cicer arietinum] gi|502089934|ref|XP_004489067.1| chr0 82934230 82940743 +
3 domain predictions
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Lj0g3v0172629.1
n.a. F-box/LRR-repeat protein [Medicago truncatula] gi|357488845|ref|XP_003614710.1| chr0 82966139 82967800 -
2 domain predictions
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Lj0g3v0173409.1
n.a. PREDICTED: LRR receptor-like serine/threonine-protein kinase ERECTA-like [Glycine max] gi|356552384|ref|XP_003544548.1| chr0 83385336 83391158 -
3 domain predictions
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Lj0g3v0177849.1
n.a. PREDICTED: F-box/FBD/LRR-repeat protein At4g26340-like [Glycine max] gi|356527370|ref|XP_003532284.1| chr0 86099922 86103273 -
2 domain predictions
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Lj0g3v0185209.1
n.a. PREDICTED: F-box/LRR-repeat protein At4g14103-like isoform X1 [Cicer arietinum] gi|502142314|ref|XP_004504896.1| chr0 90107521 90109204 -
3 domain predictions
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Lj0g3v0185209.2
n.a. PREDICTED: F-box/LRR-repeat protein At4g14103-like isoform X1 [Cicer arietinum] gi|502142314|ref|XP_004504896.1| chr0 90107521 90109252 -
3 domain predictions
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Lj0g3v0187619.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180-like [Glycine max] gi|356506579|ref|XP_003522057.1| chr0 91504417 91506133 -
3 domain predictions
 –