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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0164339 |
| Transcript ID | Lj0g3v0164339.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: TMV resistance protein N-like [Glycine max] gi|356497814|ref|XP_003517752.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 812 | 812 | – | – | |
| PANTHER | 6 | 181 | 176 | 9.00E-147 | – | |
| PANTHER | 6 | 181 | 176 | 9.00E-147 | – | |
| Gene3D | 14 | 160 | 147 | 9.50E-13 | ||
| SUPERFAMILY | 16 | 339 | 324 | 1.42E-43 | ||
| ProSiteProfiles | 91 | 113 | 23 | 4.67 | ||
| ProSiteProfiles | 138 | 161 | 24 | 4.501 | ||
| Gene3D | 161 | 256 | 96 | 2.80E-20 | ||
| SMART | 184 | 207 | 24 | 1.8 | ||
| ProSiteProfiles | 186 | 207 | 22 | 5.656 | ||
| ProSiteProfiles | 209 | 230 | 22 | 4.632 | ||
| SMART | 230 | 254 | 25 | 16 | ||
| ProSiteProfiles | 232 | 254 | 23 | 6.58 | ||
| Gene3D | 257 | 454 | 198 | 2.90E-33 | ||
| SMART | 278 | 301 | 24 | 56 | ||
| ProSiteProfiles | 280 | 301 | 22 | 4.585 | ||
| SUPERFAMILY | 315 | 634 | 320 | 8.16E-48 | ||
| ProSiteProfiles | 350 | 372 | 23 | 4.755 | ||
| SMART | 372 | 395 | 24 | 7.8 | ||
| ProSiteProfiles | 374 | 395 | 22 | 6.095 | ||
| SMART | 419 | 441 | 23 | 140 | ||
| Gene3D | 478 | 609 | 132 | 2.80E-21 | ||
| SMART | 508 | 531 | 24 | 34 | ||
| ProSiteProfiles | 510 | 531 | 22 | 7.181 | ||
| PANTHER | 523 | 768 | 246 | 9.00E-147 | – | |
| PANTHER | 523 | 768 | 246 | 9.00E-147 | – | |
| ProSiteProfiles | 554 | 576 | 23 | 4.686 | ||
| ProSiteProfiles | 577 | 599 | 23 | 6.118 | ||
| Phobius | 813 | 836 | 24 | – | – | |
| TMHMM | 816 | 838 | 23 | – | – | |
| Phobius | 837 | 839 | 3 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj0g3v0164339.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0164339.1, powered by CORGI.
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