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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0173409 |
| Transcript ID | Lj0g3v0173409.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: LRR receptor-like serine/threonine-protein kinase ERECTA-like [Glycine max] gi|356552384|ref|XP_003544548.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 5 | 5 | – | – | |
| Phobius | 1 | 24 | 24 | – | – | |
| SignalP | 1 | 24 | 24 | – | – | |
| SignalP | 1 | 24 | 24 | – | – | |
| PANTHER | 6 | 608 | 603 | 0 | – | |
| Phobius | 6 | 17 | 12 | – | – | |
| PANTHER | 6 | 608 | 603 | 0 | – | |
| Phobius | 18 | 24 | 7 | – | – | |
| Pfam | 24 | 64 | 41 | 3.40E-10 | ||
| SUPERFAMILY | 24 | 259 | 236 | 2.35E-52 | ||
| Phobius | 25 | 580 | 556 | – | – | |
| Gene3D | 25 | 313 | 289 | 8.50E-82 | ||
| SMART | 91 | 115 | 25 | 33 | ||
| ProSiteProfiles | 93 | 115 | 23 | 4.855 | ||
| ProSiteProfiles | 117 | 140 | 24 | 7.019 | ||
| ProSiteProfiles | 141 | 163 | 23 | 4.847 | ||
| SMART | 163 | 187 | 25 | 63 | ||
| ProSiteProfiles | 165 | 187 | 23 | 7.127 | ||
| Pfam | 165 | 182 | 18 | 1.1 | ||
| ProSiteProfiles | 189 | 211 | 23 | 4.886 | ||
| Pfam | 190 | 248 | 59 | 1.80E-06 | ||
| SUPERFAMILY | 204 | 539 | 336 | 4.71E-67 | – | |
| SMART | 211 | 235 | 25 | 28 | ||
| ProSiteProfiles | 213 | 235 | 23 | 5.101 | ||
| ProSiteProfiles | 237 | 260 | 24 | 5.787 | ||
| ProSiteProfiles | 261 | 282 | 22 | 4.963 | ||
| SMART | 282 | 306 | 25 | 280 | ||
| ProSiteProfiles | 284 | 306 | 23 | 5.871 | ||
| Gene3D | 314 | 560 | 247 | 2.80E-67 | ||
| SMART | 330 | 354 | 25 | 13 | ||
| ProSiteProfiles | 332 | 355 | 24 | 6.21 | ||
| ProSiteProfiles | 356 | 378 | 23 | 4.693 | ||
| Pfam | 380 | 439 | 60 | 9.30E-07 | ||
| ProSiteProfiles | 380 | 403 | 24 | 5.563 | ||
| SMART | 402 | 426 | 25 | 100 | ||
| ProSiteProfiles | 404 | 426 | 23 | 5.194 | ||
| ProSiteProfiles | 428 | 451 | 24 | 6.449 | ||
| SMART | 450 | 473 | 24 | 4.2 | ||
| Pfam | 452 | 511 | 60 | 8.70E-11 | ||
| ProSiteProfiles | 452 | 473 | 22 | 5.864 | ||
| SMART | 474 | 498 | 25 | 110 | ||
| ProSiteProfiles | 476 | 497 | 22 | 4.624 | ||
| ProSiteProfiles | 500 | 522 | 23 | 5.309 | ||
| ProSiteProfiles | 523 | 545 | 23 | 5.54 | ||
| TMHMM | 581 | 600 | 20 | – | – | |
| Phobius | 581 | 601 | 21 | – | – | |
| Phobius | 602 | 617 | 16 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj0g3v0173409.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0173409.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.