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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001757
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We have found 263 results. Now displaying 6 of 6 with 50 rows per page. This search has taken 8.258s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi6g1v0240600.1
n.a. Plasma membrane ATPase; TAIR: AT2G24520.2 plasma membrane H+-ATPase; Swiss-Prot: sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4; TrEMBL-Plants: tr|I1MGZ2|I1MGZ2_SOYBN Plasma membrane ATPase; Found in the gene: LotjaGi6g1v0240600 LjG1.1_chr6 55216846 55226511 -
3 domain predictions
1 GO term
LotjaGi6g1v0240600.2
n.a. Plasma membrane ATPase; TAIR: AT2G24520.2 plasma membrane H+-ATPase; Swiss-Prot: sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4; TrEMBL-Plants: tr|I1MGZ2|I1MGZ2_SOYBN Plasma membrane ATPase; Found in the gene: LotjaGi6g1v0240600 LjG1.1_chr6 55217692 55226486 -
3 domain predictions
1 GO term
LotjaGi6g1v0240600.3
n.a. Plasma membrane ATPase; TAIR: AT2G24520.1 plasma membrane H+-ATPase; Swiss-Prot: sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4; TrEMBL-Plants: tr|I1MGZ2|I1MGZ2_SOYBN Plasma membrane ATPase; Found in the gene: LotjaGi6g1v0240600 LjG1.1_chr6 55218212 55222181 -
3 domain predictions
1 GO term
LotjaGi6g1v0240600.4
n.a. Plasma membrane ATPase; TAIR: AT2G24520.2 plasma membrane H+-ATPase; Swiss-Prot: sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4; TrEMBL-Plants: tr|G7JUD3|G7JUD3_MEDTR Plasma membrane ATPase; Found in the gene: LotjaGi6g1v0240600 LjG1.1_chr6 55218212 55222743 -
3 domain predictions
1 GO term
LotjaGi6g1v0240600.5
n.a. Plasma membrane ATPase; TAIR: AT2G24520.1 plasma membrane H+-ATPase; Swiss-Prot: sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4; TrEMBL-Plants: tr|A0A0L9UAP3|A0A0L9UAP3_PHAAN Plasma membrane ATPase; Found in the gene: LotjaGi6g1v0240600 LjG1.1_chr6 55218212 55223020 -
3 domain predictions
1 GO term
LotjaGi6g1v0240600.6
n.a. Plasma membrane ATPase; TAIR: AT2G24520.1 plasma membrane H+-ATPase; Swiss-Prot: sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4; TrEMBL-Plants: tr|A0A0L9UAP3|A0A0L9UAP3_PHAAN Plasma membrane ATPase; Found in the gene: LotjaGi6g1v0240600 LjG1.1_chr6 55218212 55223059 -
3 domain predictions
1 GO term
LotjaGi6g1v0240600.7
n.a. Plasma membrane ATPase; TAIR: AT2G24520.1 plasma membrane H+-ATPase; Swiss-Prot: sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4; TrEMBL-Plants: tr|A0A0L9UAP3|A0A0L9UAP3_PHAAN Plasma membrane ATPase; Found in the gene: LotjaGi6g1v0240600 LjG1.1_chr6 55218212 55223108 -
3 domain predictions
1 GO term
LotjaGi6g1v0240600.8
n.a. Plasma membrane ATPase; TAIR: AT2G24520.1 plasma membrane H+-ATPase; Swiss-Prot: sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4; TrEMBL-Plants: tr|A0A0L9UAP3|A0A0L9UAP3_PHAAN Plasma membrane ATPase; Found in the gene: LotjaGi6g1v0240600 LjG1.1_chr6 55218212 55223111 -
3 domain predictions
1 GO term
LotjaGi6g1v0240600.9
n.a. Plasma membrane ATPase; TAIR: AT2G24520.1 plasma membrane H+-ATPase; Swiss-Prot: sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4; TrEMBL-Plants: tr|A0A0L9UAP3|A0A0L9UAP3_PHAAN Plasma membrane ATPase; Found in the gene: LotjaGi6g1v0240600 LjG1.1_chr6 55218495 55223065 -
3 domain predictions
1 GO term
LotjaGi6g1v0241300.1
n.a. Zinc-transporting ATPase; TAIR: AT4G30110.1 heavy metal atpase 2; Swiss-Prot: sp|Q9SZW4|HMA2_ARATH Cadmium/zinc-transporting ATPase HMA2; TrEMBL-Plants: tr|A0A151RDQ6|A0A151RDQ6_CAJCA Putative cadmium/zinc-transporting ATPase 3; Found in the gene: LotjaGi6g1v0241300 LjG1.1_chr6 55308881 55317500 -
2 domain predictions
1 GO term
LotjaGi6g1v0243100.1
n.a. Copper-transporting ATPase; TAIR: AT5G44790.1 copper-exporting ATPase / responsive-to-antagonist 1 / copper-transporting ATPase (RAN1); Swiss-Prot: sp|Q9S7J8|HMA7_ARATH Copper-transporting ATPase RAN1; TrEMBL-Plants: tr|A0A151T5L3|A0A151T5L3_CAJCA Copper-transporting ATPase RAN1; Found in the gene: LotjaGi6g1v0243100 LjG1.1_chr6 55562281 55569723 +
2 domain predictions
1 GO term
LotjaGi6g1v0243100.2
n.a. Copper-transporting ATPase; TAIR: AT5G44790.1 copper-exporting ATPase / responsive-to-antagonist 1 / copper-transporting ATPase (RAN1); Swiss-Prot: sp|Q9S7J8|HMA7_ARATH Copper-transporting ATPase RAN1; TrEMBL-Plants: tr|A0A151T5L3|A0A151T5L3_CAJCA Copper-transporting ATPase RAN1; Found in the gene: LotjaGi6g1v0243100 LjG1.1_chr6 55562413 55568201 +
2 domain predictions
1 GO term
LotjaGi6g1v0243100.3
n.a. Copper-transporting ATPase; TAIR: AT5G44790.1 copper-exporting ATPase / responsive-to-antagonist 1 / copper-transporting ATPase (RAN1); Swiss-Prot: sp|Q9S7J8|HMA7_ARATH Copper-transporting ATPase RAN1; TrEMBL-Plants: tr|A0A151T5L3|A0A151T5L3_CAJCA Copper-transporting ATPase RAN1; Found in the gene: LotjaGi6g1v0243100 LjG1.1_chr6 55562413 55568201 +
2 domain predictions
1 GO term