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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0240600 |
| Transcript ID | LotjaGi6g1v0240600.9 |
| Related isoforms 9 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Plasma membrane ATPase; TAIR: AT2G24520.1 plasma membrane H+-ATPase; Swiss-Prot: sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4; TrEMBL-Plants: tr|A0A0L9UAP3|A0A0L9UAP3_PHAAN Plasma membrane ATPase; Found in the gene: LotjaGi6g1v0240600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:55218495..55223065) extracted from Lotus japonicus Gifu genome v1.2.
TTGGTAGTTGTAGTATGTGTAGAATGTGTTATGAAATTTATTTTTTCTAACATGACTTCATTGTTTACAGGAACGTATTC CAATTGAGGAAGTGTTTGAGCAGCTGAAATGTACCAAGGAAGGTTTGTCCTCAGAGGAAGGAGCCCAAAGGATAGAAATA TTTGGTCCAAACAAGCTAGAAGAGAAGAAGGTTCTTTCTTTTATGATATCTATGCTCACATAATGTATGATACAATGACT GAATGAATGATGTGCTGATTGTTAATTAATAATTGTAATGATGTTGTTACAGGAAAGCAAGTTTCTCAAGTTTCTTGGGT TCATGTGGAATCCCCTGTCATGGGTCATGGAAGCTGCTGCTATAATGGCAATTGCTCTTGCAAATGGTGATGGAAAGCCT CCAGATTGGCAGGATTTTGTTGGCATTGTTTGCTTGCTTGTAATCAACTCCACCATCAGTTTCATCGAAGAAAACAATGC TGGAAATGCTGCTGCTGCTCTCATGGCTGGTCTTGCTCCTAAAACAAAGGTAACAAATCAAAGTTTAGTGTCTCAGTTCT GCATCAAGAAATTGTGTCTAACATCCAGGATTTGCCTGTTTACTGAGTCCACACAGACATACACCCGGCTAGTTTCTAGC TCAATTGGTACAAGACTTGCGTGACCAAGTGTTAGCGTCTGTGTGGACCCATTAAAAAGTCAAATCCCGAGTGTTATATT GTATATGCTCTTTATGCAAAAATAAATGAGAAGTGTTTCATCTCTTTTGCATAGAAGAGTACAACTCTACAGGCATTGTT TATTTGGACATTACAAGGATATGTTAATGTACAATAACTGGTTGGGCATTAAGAAGTGACAACTTTAAGCTTGTTCTGAT GATTCATAAAATGTTTACACCTTTTGCAGGTTCTTAGAGATGGTAAATGGAGTGAGCAAGAAGCTGCAATTCTAGTCCCA GGAGACATTGTAAGCATCAAGCTAGGAGACATTATTCCTGCTGATGCTCGTCTTCTTGAGGGTGATCCCTTAATGGTTGA CCAAGCAGCTCTCACTGGAGAATCACTTCCTGTGACTAGGCATCCAGGACAAGAAGTCTTCTCTGGCTCAACTTGCAAAC AAGGTGAAATTGAAGCCGTTGTTATTGCGACCGGTGTGCACACGTTCTTCGGGAAGGCGGCTCACCTGGTGGACAGTACC AACCAAGTTGGACATTTCCAGAAGGTTCTCACAGCTATTGGGAACTTTTGCATTGTCTCCATTGCAGTTGGCATGATTGC TGAGATTATAGTCATGTACCCAATTCAGCACCGGAAGTACAGGAACGGAATTGACAACTTGTTGGTCCTATTGATTGGAG GAATTCCCATTGCCATGCCTACTGTGTTGTCTGTGACAATGGCCATTGGTTCTCACAAGCTAGCTCAGCAAGGTGCCATC ACCAAGAGAATGACTGCCATAGAAGAAATGGCTGGCATGGATGTCCTTTGCAGTGACAAGACAGGAACACTCACCCTTAA CAAACTCACTGTTGACAAGAACTTGGTTGAGGTCTTTGCGAAAGGAGTGGACAAGGACCATGTGATCCTTCTTGCTGCAA GGGCTGCTAGGACTGAAAACCAGGATGCCATAGATGCTGCCATTGTTGGAATGCTTGCTGACCCTAAAGAGGTTTAAACT TTAGCCTCTCTTCAATGTCCCCATTTACTATTCTTGATTTCATTATTAGAAAAATGCAATAGTGAAATATTGAACATATC AATGCCTTGTGCAGGCAAGGGCTGGGATAAGAGAGGTGCATTTCCTTCCATTCAATCCTGTTGGCAAAAGAACTGCTTTG ACTTACATTGATGCTGATGGAAATTGGCACCGGGCAAGCAAAGGTGCTCCTGAGCAGGTACCCTTGTTCAGTTTCCTCAT AATTTGCGAGATTTAGGGTGTGAATGGATAAACAACTTAATTAAATACTTTTATGGCAATAACACTTATTCAAGTCCAAA ATAGGTTATATGTAGATATAAACGCTTATTCATAAGCTATTATGAGAAGCTTATAAAAATAAGCTGAAAACAACCTATAG ATACGTTGTTCCAAAGTGGACCTTAGTGTTACACAGCTGATGCTATCATATTTACTTTGTTGAACAGATCATGGACCTTT GTAACCTCAAGGAAGATGCAAAGAAGAAGGTCCATGCTATCATTGAAAAGTTCGCAGAAAGAGGGCTGCGCTCACTTGGT GTTGCTAGACAGGTTTTTATTGCTAGTTTTCATGTCTGGAAGTTGTGTTGAAAGTCTTTATTTCCCTTCACAAACATGAT CCTGTTTATGGTTCTTCCCTGCAGGAAGTTCCTGAGAAAACAAAGGAAAGTGCTGGTGGTCCATGGCAGTTTGTTGGAGT GTTGTCACTGTTTGATCCCCCTAGGCATGACAGTGCTGAAACCATTCGCCGAGCTCTGCACCTCGGTGTAAATGTTAAGA TGATTACAGGTAACTAATTTCCCTCATTCCTTTTATCTAATATGAAACGTCCTCAAGTAAGTTAATATCATGACTTTTGT TCTTCTCTCTAGGTGATCAACTTGCCATAGCAAAGGAAACCGGTCGGAGACTCGGAATGGGAACGAATATGTACCCATCT GCTACTTTGCTTGGTCAAGACAAAGATGCAAATATTGCTGCATTACCTGTAGATGAGTTGATTGAGAAGGCTGATGGATT TGCTGGAGTTTTTCCAGGTTCATACATTTCTAACAGCCTTTTCCTTTATTTTCTGTTCTAATGTTACTTATTATCTGTTT TTTTTAATACTATAGAGCACAAATATGAAATTGTGAAGAAGTTGCAAGAGAGGAAGCACATTTGTGGAATGACTGGAGAT GGTGTCAATGATGCTCCTGCATTGAAGAGGGCTGATATTGGAATTGCTGTTGCTGATGCCACTGATGCTGCAAGAGGAGC ATCTGATATTGTCTTGACCGAACCCGGGTTAAGTGTTATTATTAGTGCAGTGTTGACCAGCAGAGCTATTTTCCAAAGAA TGAAGAACTACACGGTTTGTTGCTCTCTGATTTGTTGATATTTTTGTTCTTTTCCACTCACCAAGTCGAAAATTAACCCC ACTTGACATTTATTTCTTTCTGTATTTCAGATCTATGCAGTATCAATCACTATCCGTATAGTGGTAAGTAGACAGTGTTG CTATAATGTATATGCAATTCATCATGACAAGAAATGAAAAGTGATCAGTTTGGATTTTCTATTCCTGAGTGCAGTTTGGC TTCATGTTTATTGCGCTGATCTGGAAATTCGACTTCTCTCCTTTCATGGTTTTGATTATTGCCATTCTAAATGATGGTAA AGTTCTAAAACTGATATTTCTTTGAGATCTCTTTATGGCTATAATGAATGACAGTGGTGATTTGAAACAAAACTTTTCAT ACCTTTAGGAACAATCATGACAATTTCCAAGGACAGGGTTAAGCCATCTCCCATGCCTGATAGCTGGAAACTAAAAGAAA TATTTGCTACTGGGATCGTACTCGGAGGTTACTTGGCACTGATGACTGTCATATTCTTCTGGCTAATGAAGGAAACTACA TTCTTCTCTGTAAGAAATATTTACCTTGCATTGCAAATATTCTTCATAGGCCTTACTGTCCTCATATTCTTTATGTCCTT GTGTTTGTGTGTCTCAAATGTTTTACACACTTGCCTTTTTTTATCACTGCAGGACAAATTTGGAGTTAGACCCCTGCATG AAAGCCCAGATGAAATGATAGCTGCTTTGTATCTACAAGTTAGCATAGTTAGCCAGGCTTTGATATTTGTTACCCGTTCG CGTAGCTGGTCCTATGTCGAACGCCCTGGAATGCTGTTAATGGGAGCTTTCCTTATTGCTCAACTGGTAAGGATGACATT CCATTGGCATTTTATCATCAAGATTTAAACCTCCCTTGAGAGAAGAATGATAATTGAGATTATGGTCTTGCAGATTGCTA CATTTATAGCAGTATATGCCAACTGGGGCTTTGCAAGGATCAAGGGAGTGGGTTGGGGCTGGGCAGGAGTCATATGGATC TATAGTGTTGTCTTCTATGTTCCACTTGACATACTAAAATTCGCCATCCGCTACATCTTGAGTGGCAAAGCTTGGCTTAA CATGCTAGAAAACAAGGTACTTTTTATAAATTTTAACTCTTACTTGTTGTATCTGGAATGGTGAAGTTTCTATGGAGATA TTAAAGCTATATTGTTTCGAAATGTGTGTGACAGACTGCCTTCACCACCAAGAAAGACTATGGTAAAGAGGAGAGGGAAG CTCAATGGGCTCATGCTCAGAGGACCCTGCATGGACTTCAACCACCAGAAACTACTGGCATTTTCAATGAAAAGAGTAGT TACAGAGAACTATCTGAGATTGCTGAGCAAGCCAAGAGAAGAGCTGAAGTTGCAAGGTAAGCAATCACATTCACATTCAC ATGCCTGGCTTCTCAAATTATCATGATAGTTATTACTACAGGACTATTTAAACCTAGGAGAATACTAAATGTTAGGATAA GAAATGCATGA
CDS sequence (LotjaGi6g1v0240600.9) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTGGAATCCCCTGTCATGGGTCATGGAAGCTGCTGCTATAATGGCAATTGCTCTTGCAAATGGTGATGGAAAGCCTCC AGATTGGCAGGATTTTGTTGGCATTGTTTGCTTGCTTGTAATCAACTCCACCATCAGTTTCATCGAAGAAAACAATGCTG GAAATGCTGCTGCTGCTCTCATGGCTGGTCTTGCTCCTAAAACAAAGGTTCTTAGAGATGGTAAATGGAGTGAGCAAGAA GCTGCAATTCTAGTCCCAGGAGACATTGTAAGCATCAAGCTAGGAGACATTATTCCTGCTGATGCTCGTCTTCTTGAGGG TGATCCCTTAATGGTTGACCAAGCAGCTCTCACTGGAGAATCACTTCCTGTGACTAGGCATCCAGGACAAGAAGTCTTCT CTGGCTCAACTTGCAAACAAGGTGAAATTGAAGCCGTTGTTATTGCGACCGGTGTGCACACGTTCTTCGGGAAGGCGGCT CACCTGGTGGACAGTACCAACCAAGTTGGACATTTCCAGAAGGTTCTCACAGCTATTGGGAACTTTTGCATTGTCTCCAT TGCAGTTGGCATGATTGCTGAGATTATAGTCATGTACCCAATTCAGCACCGGAAGTACAGGAACGGAATTGACAACTTGT TGGTCCTATTGATTGGAGGAATTCCCATTGCCATGCCTACTGTGTTGTCTGTGACAATGGCCATTGGTTCTCACAAGCTA GCTCAGCAAGGTGCCATCACCAAGAGAATGACTGCCATAGAAGAAATGGCTGGCATGGATGTCCTTTGCAGTGACAAGAC AGGAACACTCACCCTTAACAAACTCACTGTTGACAAGAACTTGGTTGAGGTCTTTGCGAAAGGAGTGGACAAGGACCATG TGATCCTTCTTGCTGCAAGGGCTGCTAGGACTGAAAACCAGGATGCCATAGATGCTGCCATTGTTGGAATGCTTGCTGAC CCTAAAGAGGCAAGGGCTGGGATAAGAGAGGTGCATTTCCTTCCATTCAATCCTGTTGGCAAAAGAACTGCTTTGACTTA CATTGATGCTGATGGAAATTGGCACCGGGCAAGCAAAGGTGCTCCTGAGCAGATCATGGACCTTTGTAACCTCAAGGAAG ATGCAAAGAAGAAGGTCCATGCTATCATTGAAAAGTTCGCAGAAAGAGGGCTGCGCTCACTTGGTGTTGCTAGACAGGAA GTTCCTGAGAAAACAAAGGAAAGTGCTGGTGGTCCATGGCAGTTTGTTGGAGTGTTGTCACTGTTTGATCCCCCTAGGCA TGACAGTGCTGAAACCATTCGCCGAGCTCTGCACCTCGGTGTAAATGTTAAGATGATTACAGGTGATCAACTTGCCATAG CAAAGGAAACCGGTCGGAGACTCGGAATGGGAACGAATATGTACCCATCTGCTACTTTGCTTGGTCAAGACAAAGATGCA AATATTGCTGCATTACCTGTAGATGAGTTGATTGAGAAGGCTGATGGATTTGCTGGAGTTTTTCCAGAGCACAAATATGA AATTGTGAAGAAGTTGCAAGAGAGGAAGCACATTTGTGGAATGACTGGAGATGGTGTCAATGATGCTCCTGCATTGAAGA GGGCTGATATTGGAATTGCTGTTGCTGATGCCACTGATGCTGCAAGAGGAGCATCTGATATTGTCTTGACCGAACCCGGG TTAAGTGTTATTATTAGTGCAGTGTTGACCAGCAGAGCTATTTTCCAAAGAATGAAGAACTACACGATCTATGCAGTATC AATCACTATCCGTATAGTGTTTGGCTTCATGTTTATTGCGCTGATCTGGAAATTCGACTTCTCTCCTTTCATGGTTTTGA TTATTGCCATTCTAAATGATGGAACAATCATGACAATTTCCAAGGACAGGGTTAAGCCATCTCCCATGCCTGATAGCTGG AAACTAAAAGAAATATTTGCTACTGGGATCGTACTCGGAGGTTACTTGGCACTGATGACTGTCATATTCTTCTGGCTAAT GAAGGAAACTACATTCTTCTCTGACAAATTTGGAGTTAGACCCCTGCATGAAAGCCCAGATGAAATGATAGCTGCTTTGT ATCTACAAGTTAGCATAGTTAGCCAGGCTTTGATATTTGTTACCCGTTCGCGTAGCTGGTCCTATGTCGAACGCCCTGGA ATGCTGTTAATGGGAGCTTTCCTTATTGCTCAACTGATTGCTACATTTATAGCAGTATATGCCAACTGGGGCTTTGCAAG GATCAAGGGAGTGGGTTGGGGCTGGGCAGGAGTCATATGGATCTATAGTGTTGTCTTCTATGTTCCACTTGACATACTAA AATTCGCCATCCGCTACATCTTGAGTGGCAAAGCTTGGCTTAACATGCTAGAAAACAAGACTGCCTTCACCACCAAGAAA GACTATGGTAAAGAGGAGAGGGAAGCTCAATGGGCTCATGCTCAGAGGACCCTGCATGGACTTCAACCACCAGAAACTAC TGGCATTTTCAATGAAAAGAGTAGTTACAGAGAACTATCTGAGATTGCTGAGCAAGCCAAGAGAAGAGCTGAAGTTGCAA GGATAAGAAATGCATGA
Protein sequence (LotjaGi6g1v0240600.9) extracted from Lotus japonicus Gifu v1.2 Proteins.
MWNPLSWVMEAAAIMAIALANGDGKPPDWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEQE AAILVPGDIVSIKLGDIIPADARLLEGDPLMVDQAALTGESLPVTRHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAA HLVDSTNQVGHFQKVLTAIGNFCIVSIAVGMIAEIIVMYPIQHRKYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHKL AQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFAKGVDKDHVILLAARAARTENQDAIDAAIVGMLAD PKEARAGIREVHFLPFNPVGKRTALTYIDADGNWHRASKGAPEQIMDLCNLKEDAKKKVHAIIEKFAERGLRSLGVARQE VPEKTKESAGGPWQFVGVLSLFDPPRHDSAETIRRALHLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSATLLGQDKDA NIAALPVDELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARGASDIVLTEPG LSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPMPDSW KLKEIFATGIVLGGYLALMTVIFFWLMKETTFFSDKFGVRPLHESPDEMIAALYLQVSIVSQALIFVTRSRSWSYVERPG MLLMGAFLIAQLIATFIAVYANWGFARIKGVGWGWAGVIWIYSVVFYVPLDILKFAIRYILSGKAWLNMLENKTAFTTKK DYGKEEREAQWAHAQRTLHGLQPPETTGIFNEKSSYRELSEIAEQAKRRAEVARIRNA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 1 | 781 | 781 | 2.62E-71 | ||
| SignalP_EUK | 1 | 24 | 24 | - | – | |
| PANTHER | 1 | 856 | 856 | 0.0 | – | |
| Phobius | 1 | 22 | 22 | - | – | |
| PANTHER | 1 | 856 | 856 | 0.0 | – | |
| Phobius | 1 | 10 | 10 | - | – | |
| CDD | 1 | 775 | 775 | 0.0 | ||
| Gene3D | 1 | 95 | 95 | 1.1E-30 | – | |
| TIGRFAM | 1 | 740 | 740 | 0.0 | ||
| Phobius | 11 | 18 | 8 | - | – | |
| Phobius | 19 | 22 | 4 | - | – | |
| Phobius | 23 | 31 | 9 | - | – | |
| Phobius | 32 | 48 | 17 | - | – | |
| TIGRFAM | 35 | 283 | 249 | 3.1E-38 | ||
| Phobius | 49 | 174 | 126 | - | – | |
| Pfam | 65 | 243 | 179 | 1.4E-47 | – | |
| SUPERFAMILY | 66 | 163 | 98 | 1.44E-28 | ||
| PRINTS | 113 | 127 | 15 | 1.4E-41 | – | |
| Gene3D | 126 | 276 | 151 | 4.8E-16 | – | |
| Phobius | 175 | 201 | 27 | - | – | |
| TMHMM | 176 | 198 | 23 | - | – | |
| Phobius | 202 | 212 | 11 | - | – | |
| TMHMM | 213 | 235 | 23 | - | – | |
| Phobius | 213 | 235 | 23 | - | – | |
| Phobius | 236 | 580 | 345 | - | – | |
| SFLD | 245 | 573 | 329 | 0.0 | – | |
| SFLD | 245 | 573 | 329 | 0.0 | – | |
| SUPERFAMILY | 259 | 569 | 311 | 9.89E-41 | ||
| Pfam | 259 | 536 | 278 | 2.2E-19 | – | |
| PRINTS | 263 | 277 | 15 | 1.4E-41 | – | |
| ProSitePatterns | 265 | 271 | 7 | - | ||
| Gene3D | 277 | 418 | 142 | 3.7E-47 | ||
| PRINTS | 379 | 397 | 19 | 1.4E-59 | ||
| PRINTS | 417 | 428 | 12 | 1.4E-41 | – | |
| Gene3D | 419 | 483 | 65 | 5.6E-6 | ||
| PRINTS | 439 | 449 | 11 | 1.4E-41 | – | |
| Gene3D | 484 | 780 | 297 | 1.7E-111 | – | |
| PRINTS | 494 | 510 | 17 | 1.4E-59 | ||
| TIGRFAM | 497 | 611 | 115 | 5.1E-28 | ||
| PRINTS | 522 | 538 | 17 | 1.4E-59 | ||
| PRINTS | 522 | 541 | 20 | 1.4E-41 | – | |
| PRINTS | 545 | 557 | 13 | 1.4E-41 | – | |
| PRINTS | 553 | 578 | 26 | 1.4E-59 | ||
| TMHMM | 581 | 603 | 23 | - | – | |
| Phobius | 581 | 603 | 23 | - | – | |
| Phobius | 604 | 608 | 5 | - | – | |
| Phobius | 609 | 626 | 18 | - | – | |
| Phobius | 627 | 645 | 19 | - | – | |
| TMHMM | 645 | 667 | 23 | - | – | |
| Phobius | 646 | 667 | 22 | - | – | |
| Phobius | 668 | 688 | 21 | - | – | |
| Phobius | 689 | 708 | 20 | - | – | |
| TMHMM | 690 | 707 | 18 | - | – | |
| PRINTS | 694 | 715 | 22 | 1.4E-59 | ||
| Phobius | 709 | 719 | 11 | - | – | |
| Phobius | 720 | 741 | 22 | - | – | |
| TMHMM | 722 | 744 | 23 | - | – | |
| Phobius | 742 | 752 | 11 | - | – | |
| TMHMM | 751 | 773 | 23 | - | – | |
| Phobius | 753 | 770 | 18 | - | – | |
| Phobius | 771 | 858 | 88 | - | – | |
| Coils | 836 | 856 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleotide binding | Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. | ||
| Molecular function | Proton-exporting ATPase activity, phosphorylative mechanism | Enables the transfer of protons from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) -> ADP + phosphate + H+(out). These transporters use a phosphorylative mechanism, which have a phosphorylated intermediate state during the ion transport cycle. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Proton export across plasma membrane | The directed movement of hydrogen ions (protons) from inside a cell, across the plasma membrane and into the extracellular region. |
Expression pattern of LotjaGi6g1v0240600.9, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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