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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR002182
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 683 results. Now displaying 3 of 14 with 50 rows per page. This search has taken 5.445s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0276849.1
n.a. NBS-containing resistance-like protein [Medicago truncatula] gi|357460983|ref|XP_003600773.1| chr0 143699929 143702518 -
2 domain predictions
1 GO term
Lj0g3v0281509.1
n.a. disease resistance protein [Glycine max] gi|351720930|ref|NP_001235657.1| chr0 145932835 145936508 +
2 domain predictions
1 GO term
Lj0g3v0281509.2
n.a. disease resistance protein [Glycine max] gi|351720930|ref|NP_001235657.1| chr0 145932835 145936508 +
2 domain predictions
1 GO term
Lj0g3v0282469.1
n.a. NBS-LRR resistance-like protein 4G [Medicago truncatula] gi|357515077|ref|XP_003627827.1| chr0 146440998 146447078 +
2 domain predictions
1 GO term
Lj0g3v0283809.1
n.a. PREDICTED: TMV resistance protein N-like [Cicer arietinum] gi|502156468|ref|XP_004510489.1| chr0 147176581 147182959 -
2 domain predictions
1 GO term
Lj0g3v0283809.3
n.a. NBS resistance protein [Medicago truncatula] gi|357513713|ref|XP_003627145.1| chr0 147176581 147181145 -
2 domain predictions
1 GO term
Lj0g3v0290169.1
n.a. NBS-containing resistance-like protein [Medicago truncatula] gi|357521758|ref|XP_003600237.1| chr0 150676133 150677102 +
2 domain predictions
1 GO term
Lj0g3v0290189.1
n.a. NBS-containing resistance-like protein [Medicago truncatula] gi|357460983|ref|XP_003600773.1| chr0 150682459 150684784 +
2 domain predictions
1 GO term
Lj0g3v0293239.1
n.a. Disease resistance-like protein [Medicago truncatula] gi|357486939|ref|XP_003613757.1| chr0 152237603 152239296 -
2 domain predictions
1 GO term
Lj0g3v0294259.1
n.a. n.a. chr0 152891486 152893698 +
2 domain predictions
1 GO term
Lj0g3v0294269.1
n.a. Disease resistance-like protein GS0-1 [Medicago truncatula] gi|357494433|ref|XP_003617505.1| chr0 152891486 152894936 -
2 domain predictions
1 GO term
Lj0g3v0294279.1
n.a. Cc-nbs-lrr resistance protein [Medicago truncatula] gi|357494411|ref|XP_003617494.1| chr0 152895123 152897638 -
2 domain predictions
1 GO term
Lj0g3v0297389.1
n.a. n.a. chr0 154572869 154582454 -
2 domain predictions
1 GO term
Lj0g3v0297389.2
n.a. TMV resistance protein N [Medicago truncatula] gi|357509247|ref|XP_003624912.1| chr0 154572869 154582454 -
2 domain predictions
1 GO term
Lj0g3v0297389.3
n.a. n.a. chr0 154572869 154582454 -
2 domain predictions
1 GO term
Lj0g3v0302489.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356561802|ref|XP_003549167.1| chr0 157373359 157379450 -
2 domain predictions
1 GO term
Lj0g3v0302489.2
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356561802|ref|XP_003549167.1| chr0 157375434 157379450 -
2 domain predictions
1 GO term
Lj0g3v0302529.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356573485|ref|XP_003554889.1| chr0 157389483 157393887 -
2 domain predictions
1 GO term
Lj0g3v0302529.2
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356573485|ref|XP_003554889.1| chr0 157389735 157393887 -
2 domain predictions
1 GO term
Lj0g3v0306049.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356499338|ref|XP_003518498.1| chr0 159614024 159621107 -
2 domain predictions
1 GO term
Lj0g3v0307459.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356499336|ref|XP_003518497.1| chr0 160465872 160470657 -
2 domain predictions
1 GO term
Lj0g3v0310429.1
n.a. NBS-containing resistance-like protein [Medicago truncatula] gi|357459929|ref|XP_003600246.1| chr0 162101568 162102680 -
2 domain predictions
1 GO term
Lj0g3v0310499.1
n.a. disease resistance protein [Phaseolus vulgaris] gi|74231152|gb|ABA00702.1| chr0 162172119 162177717 +
2 domain predictions
1 GO term
Lj0g3v0311349.1
n.a. n.a. chr0 162557005 162559516 +
2 domain predictions
1 GO term
Lj0g3v0312469.1
n.a. PREDICTED: probable disease resistance protein At1g52660-like [Cicer arietinum] gi|502183056|ref|XP_004517051.1| chr0 163130203 163135966 -
2 domain predictions
1 GO term
Lj0g3v0317379.1
n.a. NBS-containing resistance-like protein [Medicago truncatula] gi|357459929|ref|XP_003600246.1| chr0 165805840 165811436 +
2 domain predictions
1 GO term
Lj0g3v0317389.1
n.a. n.a. chr0 165807030 165810658 -
2 domain predictions
1 GO term
Lj0g3v0318669.1
n.a. PREDICTED: disease resistance protein RGA2 [Vitis vinifera] gi|225456041|ref|XP_002277479.1| chr0 166437791 166440873 +
2 domain predictions
1 GO term
Lj0g3v0318919.1
n.a. PREDICTED: heat shock cognate 70 kDa protein isoform 1 [Vitis vinifera] gi|225440324|ref|XP_002263599.1| chr0 166537883 166542519 +
2 domain predictions
1 GO term
Lj0g3v0327379.2
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356570335|ref|XP_003553345.1| chr0 171143800 171147442 -
2 domain predictions
1 GO term
Lj0g3v0327379.4
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356570335|ref|XP_003553345.1| chr0 171143800 171147442 -
2 domain predictions
1 GO term
Lj0g3v0328349.1
n.a. TIR-similar-domain-containing protein TSDC [Medicago truncatula] gi|357494551|ref|XP_003617564.1| chr0 171636447 171643271 -
2 domain predictions
1 GO term
Lj0g3v0328359.1
n.a. PREDICTED: disease resistance protein RPM1-like [Glycine max] gi|356524195|ref|XP_003530717.1| chr0 171646292 171649686 -
2 domain predictions
1 GO term
Lj0g3v0329149.1
n.a. TIR-NBS-LRR RCT1-like resistance protein [Medicago sativa] gi|193584702|gb|ACF19651.1| chr0 172066392 172068983 +
2 domain predictions
1 GO term
Lj0g3v0331109.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356506778|ref|XP_003522153.1| chr0 173038503 173053389 +
2 domain predictions
1 GO term
Lj0g3v0331329.1
n.a. n.a. chr0 173160736 173169872 +
2 domain predictions
1 GO term
Lj0g3v0331339.3
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356561802|ref|XP_003549167.1| chr0 173162194 173169872 -
2 domain predictions
1 GO term
Lj0g3v0333849.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356497765|ref|XP_003517729.1| chr0 174729003 174736727 +
2 domain predictions
1 GO term
Lj0g3v0337299.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356542401|ref|XP_003539655.1| chr0 176639095 176648358 +
2 domain predictions
1 GO term
Lj0g3v0339369.1
n.a. PREDICTED: probable disease resistance protein At1g52660-like [Cicer arietinum] gi|502183056|ref|XP_004517051.1| chr0 177754175 177762077 +
2 domain predictions
1 GO term
Lj0g3v0340619.1
n.a. PREDICTED: TMV resistance protein N-like, partial [Cicer arietinum] gi|502171577|ref|XP_004515064.1| chr0 178429655 178436829 +
2 domain predictions
1 GO term
Lj0g3v0343429.1
n.a. PREDICTED: probable disease resistance protein At5g66900-like [Glycine max] gi|356565670|ref|XP_003551061.1| chr0 180009862 180012193 -
2 domain predictions
1 GO term
Lj0g3v0351789.1
n.a. PREDICTED: disease resistance protein RPM1-like [Cicer arietinum] gi|502127634|ref|XP_004499780.1| chr0 184972395 184975893 -
2 domain predictions
1 GO term
Lj0g3v0351799.1
n.a. NBS resistance protein [Medicago truncatula] gi|357456269|ref|XP_003598415.1| chr0 184977009 184987464 -
2 domain predictions
1 GO term
Lj0g3v0353669.1
n.a. TMV resistance protein N [Medicago truncatula] gi|357509247|ref|XP_003624912.1| chr0 186182251 186187700 -
2 domain predictions
1 GO term
Lj0g3v0353789.1
n.a. Tir-nbs-lrr resistance protein [Medicago truncatula] gi|357468511|ref|XP_003604540.1| chr0 186236266 186241590 -
2 domain predictions
1 GO term
Lj0g3v0354059.1
n.a. NB-LRR type disease resistance protein Rps1-k-2 [Medicago truncatula] gi|357457003|ref|XP_003598782.1| chr0 186451081 186458452 +
2 domain predictions
1 GO term
Lj0g3v0354059.3
n.a. NB-LRR type disease resistance protein Rps1-k-2 [Medicago truncatula] gi|357457003|ref|XP_003598782.1| chr0 186451968 186458452 +
2 domain predictions
1 GO term
Lj0g3v0354289.1
n.a. NBS resistance protein-like protein [Medicago truncatula] gi|357469163|ref|XP_003604866.1| chr0 186588734 186602646 +
2 domain predictions
1 GO term
Lj0g3v0355009.1
n.a. PREDICTED: TMV resistance protein N-like [Cicer arietinum] gi|502156470|ref|XP_004510490.1| chr0 186964869 186966644 -
2 domain predictions
1 GO term