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Lj0g3v0283809.1

Overview

Field Value
Gene ID Lj0g3v0283809
Transcript ID Lj0g3v0283809.1
Related isoforms 3
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: TMV resistance protein N-like [Cicer arietinum] gi|502156468|ref|XP_004510489.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11017
1 380 380 3.30E-224 –
PANTHER
PTHR11017:SF162
1 380 380 3.30E-224 –
SUPERFAMILY
SSF52540
5 261 257 3.48E-42
IPR027417
Gene3D
G3DSA:3.40.50.300
31 149 119 7.80E-07
IPR027417
Pfam
PF00931
31 269 239 6.20E-22
IPR002182
PRINTS
PR00364
34 49 16 1.80E-18 –
PRINTS
PR00364
108 122 15 1.80E-18 –
PRINTS
PR00364
200 214 15 1.80E-18 –
SUPERFAMILY
SSF52058
306 322 17 2.38E-34
IPR032675
SUPERFAMILY
SSF52058
366 677 312 2.38E-34
IPR032675
Gene3D
G3DSA:3.80.10.10
402 678 277 1.60E-29
IPR032675
PANTHER
PTHR11017
403 539 137 3.30E-224 –
PANTHER
PTHR11017:SF162
403 539 137 3.30E-224 –
PRINTS
PR00364
446 462 17 1.80E-18 –
PANTHER
PTHR11017:SF162
650 906 257 3.30E-224 –
PANTHER
PTHR11017
650 906 257 3.30E-224 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0043531
Molecular function ADP binding Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate.
Subterm of

Genome browser

LORE1 insertions 17

Expression data

Expression pattern

Expression pattern of Lj0g3v0283809.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0283809.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.