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Lj0g3v0310499.1

Overview

Field Value
Gene ID Lj0g3v0310499
Transcript ID Lj0g3v0310499.1
Lotus japonicus genome version MG20 v3.0
Description disease resistance protein [Phaseolus vulgaris] gi|74231152|gb|ABA00702.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11017:SF162
1 436 436 2.50E-235 –
PANTHER
PTHR11017
1 436 436 2.50E-235 –
SUPERFAMILY
SSF52200
17 162 146 4.71E-40
IPR000157
ProSiteProfiles
PS50104
21 159 139 28.016
IPR000157
SMART
SM00255
22 159 138 1.30E-42
IPR000157
Gene3D
G3DSA:3.40.50.10140
22 137 116 1.20E-22
IPR000157
Pfam
PF01582
22 197 176 1.10E-49
IPR000157
SUPERFAMILY
SSF52540
189 398 210 8.76E-42
IPR027417
Pfam
PF00931
248 403 156 7.40E-20
IPR002182
SUPERFAMILY
SSF52047
404 514 111 6.91E-08 –
Gene3D
G3DSA:3.80.10.10
430 515 86 4.60E-04
IPR032675
PANTHER
PTHR11017:SF162
490 682 193 2.50E-235 –
PANTHER
PTHR11017
490 682 193 2.50E-235 –
Gene3D
G3DSA:3.80.10.10
552 822 271 8.00E-37
IPR032675
SUPERFAMILY
SSF52047
560 843 284 3.45E-39 –
PANTHER
PTHR11017:SF162
794 865 72 2.50E-235 –
PANTHER
PTHR11017
794 865 72 2.50E-235 –
PANTHER
PTHR11017
889 1025 137 2.50E-235 –
PANTHER
PTHR11017:SF162
889 1025 137 2.50E-235 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of
GO:0007165
Biological process Signal transduction The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.
Subterm of
Part of
GO:0043531
Molecular function ADP binding Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate.
Subterm of

Genome browser

LORE1 insertions 2

Expression data

Expression pattern

Expression pattern of Lj0g3v0310499.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0310499.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.