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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR017853
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 769 results. Now displaying 4 of 16 with 50 rows per page. This search has taken 6.052s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v4139390.1
n.a. PREDICTED: glucan endo-1,3-beta-glucosidase 12-like [Cicer arietinum] gi|502097693|ref|XP_004491054.1| chr1 48991932 48993540 +
2 domain predictions
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Lj1g3v4140630.1
n.a. PREDICTED: alpha-glucosidase yihQ-like [Glycine max] gi|356504690|ref|XP_003521128.1| chr1 49156844 49162087 +
2 domain predictions
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Lj1g3v4657820.1
n.a. PREDICTED: alpha-L-fucosidase 1-like [Cicer arietinum] gi|502119526|ref|XP_004496649.1| chr1 55287807 55292170 -
2 domain predictions
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Lj1g3v4699750.1
n.a. starch branching enzyme I [Pisum sativum] gi|1345570|emb|CAA56319.1| chr1 56048407 56065886 -
2 domain predictions
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Lj1g3v4793990.1
n.a. Mannan endo-1,4-beta-mannosidase [Medicago truncatula] gi|357511747|ref|XP_003626162.1| chr1 57792895 57794637 +
2 domain predictions
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Lj1g3v4862960.1
n.a. Beta-xylosidase [Medicago truncatula] gi|357511337|ref|XP_003625957.1| chr1 58852309 58864087 +
2 domain predictions
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Lj1g3v4931610.1
n.a. PREDICTED: mannosylglycoprotein endo-beta-mannosidase-like [Cicer arietinum] gi|502113348|ref|XP_004494621.1| chr1 60030269 60036184 -
2 domain predictions
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Lj1g3v5021150.1
n.a. PREDICTED: acidic endochitinase [Vitis vinifera] gi|225454383|ref|XP_002279147.1| chr1 61248636 61253656 +
2 domain predictions
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Lj1g3v5021150.2
n.a. PREDICTED: acidic endochitinase [Vitis vinifera] gi|225454383|ref|XP_002279147.1| chr1 61252115 61253656 +
2 domain predictions
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Lj2g3v0609680.1
n.a. PREDICTED: heparanase-like protein 2-like [Glycine max] gi|356502592|ref|XP_003520102.1| chr2 8248773 8252019 +
2 domain predictions
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Lj2g3v0621500.1
n.a. PREDICTED: probable glucan 1,3-beta-glucosidase A-like [Glycine max] gi|356525499|ref|XP_003531362.1| chr2 8652414 8653766 +
2 domain predictions
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Lj2g3v0632120.1
n.a. PREDICTED: beta-amylase 1, chloroplastic-like [Cicer arietinum] gi|502173079|ref|XP_004515248.1| chr2 9087560 9088278 -
2 domain predictions
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Lj2g3v0632130.1
n.a. PREDICTED: beta-amylase 1, chloroplastic-like [Cicer arietinum] gi|502173079|ref|XP_004515248.1| chr2 9088367 9092194 -
2 domain predictions
 –
Lj2g3v0689040.1
n.a. PREDICTED: beta-glucosidase 44-like [Glycine max] gi|356531160|ref|XP_003534146.1| chr2 10885973 10891668 +
2 domain predictions
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Lj2g3v0890210.1
n.a. PREDICTED: glucan endo-1,3-beta-glucosidase 13-like [Cicer arietinum] gi|502164159|ref|XP_004513066.1| chr2 13611077 13612490 +
2 domain predictions
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Lj2g3v0891220.1
n.a. PREDICTED: glucan endo-1,3-beta-glucosidase 13-like [Glycine max] gi|356523785|ref|XP_003530515.1| chr2 13612773 13614750 +
2 domain predictions
 –
Lj2g3v0932880.1
n.a. PREDICTED: galactinol--sucrose galactosyltransferase-like [Glycine max] gi|356511694|ref|XP_003524558.1| chr2 14852780 14857035 +
2 domain predictions
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Lj2g3v1155320.1
n.a. PREDICTED: alpha-xylosidase 1-like [Cicer arietinum] gi|502095022|ref|XP_004490355.1| chr2 18220776 18222979 -
2 domain predictions
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Lj2g3v1155420.1
n.a. PREDICTED: alpha-xylosidase-like [Glycine max] gi|356495935|ref|XP_003516826.1| chr2 18235528 18247667 -
2 domain predictions
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Lj2g3v1267200.1
n.a. PREDICTED: acidic endochitinase-like [Cicer arietinum] gi|502094104|ref|XP_004490140.1| chr2 20157524 20158423 +
2 domain predictions
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Lj2g3v1338900.1
n.a. PREDICTED: alpha-amylase 3, chloroplastic-like isoform X1 [Cicer arietinum] gi|502093621|ref|XP_004489999.1| chr2 21044014 21050553 -
2 domain predictions
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Lj2g3v1389210.1
n.a. PREDICTED: beta-glucosidase 11-like [Glycine max] gi|356523324|ref|XP_003530290.1| chr2 21907152 21912806 -
2 domain predictions
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Lj2g3v1468060.1
n.a. PREDICTED: probable beta-D-xylosidase 6-like [Cicer arietinum] gi|502162573|ref|XP_004512546.1| chr2 23297139 23300524 -
2 domain predictions
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Lj2g3v1549950.1
n.a. Alpha glucosidase-like protein [Medicago truncatula] gi|357484583|ref|XP_003612579.1| chr2 24451232 24457997 -
2 domain predictions
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Lj2g3v1550200.1
n.a. PREDICTED: beta-amylase 8-like [Cicer arietinum] gi|502161971|ref|XP_004512346.1| chr2 24596340 24601175 +
2 domain predictions
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Lj2g3v1550200.2
n.a. PREDICTED: beta-amylase 8-like [Cicer arietinum] gi|502161971|ref|XP_004512346.1| chr2 24596340 24601175 +
2 domain predictions
 –
Lj2g3v1728780.1
n.a. PREDICTED: beta-galactosidase 3-like [Cicer arietinum] gi|502161230|ref|XP_004512085.1| chr2 26533291 26539601 +
2 domain predictions
 –
Lj2g3v1728780.2
n.a. PREDICTED: beta-galactosidase 3-like [Cicer arietinum] gi|502161230|ref|XP_004512085.1| chr2 26533417 26534904 +
2 domain predictions
 –
Lj2g3v1730220.1
n.a. Mannan endo-1,4-beta-mannosidase [Medicago truncatula] gi|357483557|ref|XP_003612065.1| chr2 26687053 26689558 -
2 domain predictions
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Lj2g3v1988790.2
n.a. PREDICTED: LOW QUALITY PROTEIN: beta-amylase 3, chloroplastic-like, partial [Glycine max] gi|356495576|ref|XP_003516651.1| chr2 29588556 29590413 +
2 domain predictions
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Lj2g3v1988800.1
n.a. beta-amylase [Glycine max] gi|351726184|ref|NP_001236350.1| chr2 29590430 29591654 +
2 domain predictions
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Lj2g3v2879510.1
n.a. PREDICTED: glucan endo-1,3-beta-glucosidase 12-like isoform X2 [Cicer arietinum] gi|502097882|ref|XP_004491104.1| chr2 37527533 37530401 -
2 domain predictions
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Lj2g3v3034050.1
n.a. PREDICTED: glucan endo-1,3-beta-glucosidase 3-like [Glycine max] gi|356511321|ref|XP_003524375.1| chr2 39200950 39205340 -
2 domain predictions
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Lj2g3v3209740.1
n.a. PREDICTED: glucan endo-1,3-beta-glucosidase 12-like [Glycine max] gi|356501562|ref|XP_003519593.1| chr2 41084641 41086715 -
2 domain predictions
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Lj2g3v3335040.1
n.a. Alkaline alpha galactosidase I [Medicago truncatula] gi|357495237|ref|XP_003617907.1| chr2 42204830 42210560 +
2 domain predictions
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Lj2g3v3335040.2
n.a. Alkaline alpha galactosidase I [Medicago truncatula] gi|357495237|ref|XP_003617907.1| chr2 42206059 42210560 +
2 domain predictions
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Lj3g3v0115970.1
n.a. PREDICTED: beta-galactosidase 7-like [Glycine max] gi|356558952|ref|XP_003547766.1| chr3 852709 853414 +
2 domain predictions
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Lj3g3v0211980.1
n.a. Acidic endochitinase [Theobroma cacao] gi|508776152|gb|EOY23408.1| chr3 1331533 1332107 -
2 domain predictions
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Lj3g3v0307970.1
n.a. PREDICTED: beta-galactosidase 1-like [Cicer arietinum] gi|502081306|ref|XP_004486826.1| chr3 2279285 2285448 +
2 domain predictions
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Lj3g3v0323160.1
n.a. Beta-galactosidase 17 [Theobroma cacao] gi|508779864|gb|EOY27120.1| chr3 2361968 2376967 -
2 domain predictions
 –
Lj3g3v0323160.2
n.a. Beta-galactosidase 17 [Theobroma cacao] gi|508779864|gb|EOY27120.1| chr3 2362354 2376967 -
2 domain predictions
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Lj3g3v0464730.1
n.a. PREDICTED: beta-glucosidase 12-like [Cicer arietinum] gi|502146568|ref|XP_004506510.1| chr3 5356772 5359042 +
2 domain predictions
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Lj3g3v0464740.1
n.a. PREDICTED: beta-glucosidase 12-like [Cicer arietinum] gi|502146568|ref|XP_004506510.1| chr3 5359508 5360875 +
2 domain predictions
 –
Lj3g3v0464740.2
n.a. PREDICTED: beta-glucosidase 12-like [Cicer arietinum] gi|502146568|ref|XP_004506510.1| chr3 5359718 5360875 +
2 domain predictions
 –
Lj3g3v0464860.1
n.a. PREDICTED: beta-glucosidase 12-like [Cicer arietinum] gi|502146568|ref|XP_004506510.1| chr3 5364091 5368464 +
2 domain predictions
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Lj3g3v0718350.1
n.a. Beta-1 3-glucanase [Medicago truncatula] gi|357513321|ref|XP_003626949.1| chr3 7819510 7822638 +
2 domain predictions
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Lj3g3v0786210.1
n.a. PREDICTED: beta-glucosidase 12-like [Cicer arietinum] gi|502146568|ref|XP_004506510.1| chr3 9326608 9331899 -
2 domain predictions
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Lj3g3v0824680.1
n.a. PREDICTED: beta-glucosidase 42-like [Glycine max] gi|356539146|ref|XP_003538061.1| chr3 10152586 10162607 +
2 domain predictions
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Lj3g3v0824910.1
n.a. PREDICTED: alpha-N-acetylglucosaminidase-like [Cicer arietinum] gi|502128379|ref|XP_004499942.1| chr3 10320914 10334851 -
2 domain predictions
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Lj3g3v0895940.1
n.a. PREDICTED: LOW QUALITY PROTEIN: vicianin hydrolase-like [Glycine max] gi|356557124|ref|XP_003546868.1| chr3 10808985 10812942 -
2 domain predictions
 –