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| Field | Value |
|---|---|
| Gene ID | Lj3g3v0323160 |
| Transcript ID | Lj3g3v0323160.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Beta-galactosidase 17 [Theobroma cacao] gi|508779864|gb|EOY27120.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 496 | 496 | – | – | |
| MobiDBLite | 1 | 55 | 55 | – | – | |
| PANTHER | 15 | 506 | 492 | 2.20E-211 | – | |
| PANTHER | 15 | 506 | 492 | 2.20E-211 | – | |
| Gene3D | 72 | 95 | 24 | 4.40E-05 | ||
| SUPERFAMILY | 72 | 95 | 24 | 5.55E-07 | – | |
| SMART | 73 | 95 | 23 | 0.11 | ||
| ProSiteProfiles | 73 | 95 | 23 | 10.824 | ||
| ProSitePatterns | 75 | 95 | 21 | – | ||
| SMART | 114 | 144 | 31 | 82 | ||
| Gene3D | 137 | 170 | 34 | 2.40E-04 | ||
| SUPERFAMILY | 144 | 169 | 26 | 5.55E-07 | – | |
| SMART | 149 | 169 | 21 | 140 | ||
| MobiDBLite | 262 | 353 | 92 | – | – | |
| TMHMM | 497 | 519 | 23 | – | – | |
| Phobius | 497 | 517 | 21 | – | – | |
| Phobius | 518 | 873 | 356 | – | – | |
| Gene3D | 539 | 849 | 311 | 7.50E-103 | ||
| SUPERFAMILY | 541 | 852 | 312 | 5.28E-85 | ||
| Pfam | 547 | 849 | 303 | 6.30E-100 | ||
| PRINTS | 550 | 567 | 18 | 4.70E-36 | ||
| PRINTS | 571 | 589 | 19 | 4.70E-36 | ||
| PRINTS | 626 | 645 | 20 | 4.70E-36 | ||
| PRINTS | 682 | 697 | 16 | 4.70E-36 | ||
| ProSitePatterns | 684 | 696 | 13 | – | ||
| PRINTS | 775 | 790 | 16 | 4.70E-36 | ||
| PRINTS | 811 | 826 | 16 | 4.70E-36 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of Lj3g3v0323160.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v0323160.1, powered by CORGI.
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