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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR023753
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We have found 223 results. Now displaying 2 of 5 with 50 rows per page. This search has taken 5.857s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0294619.1
n.a. PREDICTED: ubiquinone biosynthesis monooxygenase COQ6-like isoform X1 [Cicer arietinum] gi|502103130|ref|XP_004492209.1| chr0 153114410 153117723 +
2 domain predictions
2 GO terms
Lj0g3v0294619.2
n.a. PREDICTED: ubiquinone biosynthesis monooxygenase COQ6-like isoform X1 [Cicer arietinum] gi|502103130|ref|XP_004492209.1| chr0 153114410 153124085 +
3 domain predictions
2 GO terms
Lj0g3v0298799.1
n.a. PREDICTED: squalene monooxygenase-like [Glycine max] gi|356521261|ref|XP_003529275.1| chr0 155266521 155268464 +
3 domain predictions
2 GO terms
Lj0g3v0298799.2
n.a. PREDICTED: squalene monooxygenase-like [Glycine max] gi|356521261|ref|XP_003529275.1| chr0 155266521 155271352 +
3 domain predictions
2 GO terms
Lj0g3v0308259.1
n.a. PREDICTED: flavin-containing monooxygenase YUCCA8-like [Glycine max] gi|356537246|ref|XP_003537140.1| chr0 160924239 160927738 -
3 domain predictions
2 GO terms
Lj0g3v0336549.1
n.a. PREDICTED: glutathione reductase, cytosolic-like [Cicer arietinum] gi|502169810|ref|XP_004514690.1| chr0 176241923 176248721 -
4 domain predictions
2 GO terms
Lj0g3v0338859.1
n.a. cytosolic-like glutathione reductase [Lathyrus sativus] gi|166239743|gb|ABY86428.1| chr0 177451440 177458490 -
4 domain predictions
2 GO terms
Lj0g3v0359769.1
n.a. PREDICTED: prolycopene isomerase, chloroplastic-like [Cicer arietinum] gi|502126627|ref|XP_004499377.1| chr0 189420422 189422183 -
3 domain predictions
2 GO terms
Lj0g3v0359769.2
n.a. PREDICTED: prolycopene isomerase, chloroplastic-like [Glycine max] gi|356522129|ref|XP_003529702.1| chr0 189420422 189423631 -
3 domain predictions
2 GO terms
Lj0g3v0362799.1
n.a. PREDICTED: zeaxanthin epoxidase, chloroplastic-like [Glycine max] gi|356534423|ref|XP_003535754.1| chr0 191328981 191331486 +
3 domain predictions
2 GO terms
Lj0g3v0362799.2
n.a. PREDICTED: zeaxanthin epoxidase, chloroplastic-like [Glycine max] gi|356534423|ref|XP_003535754.1| chr0 191328981 191331486 +
3 domain predictions
2 GO terms
Lj1g3v1355770.1
n.a. PREDICTED: farnesylcysteine lyase-like isoform X1 [Cicer arietinum] gi|502137092|ref|XP_004502965.1| chr1 16156513 16159402 +
3 domain predictions
2 GO terms
Lj1g3v1779010.1
n.a. PREDICTED: squalene monooxygenase-like isoform X1 [Cicer arietinum] gi|502132708|ref|XP_004501491.1| chr1 20585326 20590913 +
3 domain predictions
2 GO terms
Lj1g3v1779010.2
n.a. PREDICTED: squalene monooxygenase-like isoform X5 [Cicer arietinum] gi|502132716|ref|XP_004501495.1| chr1 20586990 20590913 +
3 domain predictions
2 GO terms
Lj1g3v1989420.1
n.a. Sarcosine oxidase [Medicago truncatula] gi|357466531|ref|XP_003603550.1| chr1 23377061 23378814 -
3 domain predictions
2 GO terms
Lj1g3v2036560.1
n.a. PREDICTED: flavin-containing monooxygenase YUCCA6-like [Glycine max] gi|356507869|ref|XP_003522685.1| chr1 23982085 23986890 +
3 domain predictions
2 GO terms
Lj1g3v2143360.1
n.a. Lysine-specific histone demethylase-like protein [Medicago truncatula] gi|357466899|ref|XP_003603734.1| chr1 25918472 25925436 -
2 domain predictions
2 GO terms
Lj1g3v3330000.1
n.a. PREDICTED: probable flavin-containing monooxygenase 1 [Vitis vinifera] gi|225428153|ref|XP_002278651.1| chr1 37913751 37915972 +
3 domain predictions
2 GO terms
Lj1g3v3597200.1
n.a. PREDICTED: D-amino acid dehydrogenase small subunit-like [Cicer arietinum] gi|502103233|ref|XP_004492233.1| chr1 41387272 41393750 +
3 domain predictions
2 GO terms
Lj1g3v3642090.1
n.a. PREDICTED: probable monodehydroascorbate reductase, cytoplasmic isoform 2-like isoform X1 [Cicer arietinum] gi|502100498|ref|XP_004491733.1| chr1 41935567 41939640 -
4 domain predictions
2 GO terms
Lj1g3v3834100.1
n.a. protoporphyrinogen IX oxidase [Glycine max] gi|351726950|ref|NP_001236376.1| chr1 43570781 43582003 +
3 domain predictions
2 GO terms
Lj1g3v3834100.2
n.a. protoporphyrinogen IX oxidase [Glycine max] gi|351726950|ref|NP_001236376.1| chr1 43577211 43582003 +
2 domain predictions
2 GO terms
Lj1g3v4515660.1
n.a. RecName: Full=Long-chain-alcohol oxidase FAO2; AltName: Full=Long-chain fatty alcohol oxidase 2gi|209570222|emb|CAP15763.1| long chain fatty alcohol oxidase FAO2 [Lotus japonicus] gi|300680945|sp|B5WWZ9.1|FAO2_LOTJA chr1 53039037 53041342 +
3 domain predictions
2 GO terms
Lj1g3v4515670.1
n.a. RecName: Full=Long-chain-alcohol oxidase FAO2; AltName: Full=Long-chain fatty alcohol oxidase 2gi|209570222|emb|CAP15763.1| long chain fatty alcohol oxidase FAO2 [Lotus japonicus] gi|300680945|sp|B5WWZ9.1|FAO2_LOTJA chr1 53039210 53042790 +
3 domain predictions
2 GO terms
Lj1g3v4528740.1
n.a. PREDICTED: flavin-containing monooxygenase YUCCA8-like [Glycine max] gi|356572315|ref|XP_003554314.1| chr1 53502790 53504610 +
3 domain predictions
2 GO terms
Lj1g3v4764550.1
n.a. PREDICTED: probable indole-3-pyruvate monooxygenase YUCCA10-like [Cicer arietinum] gi|502112410|ref|XP_004494322.1| chr1 57376410 57378105 -
3 domain predictions
2 GO terms
Lj1g3v4764680.3
n.a. PREDICTED: probable indole-3-pyruvate monooxygenase YUCCA10-like [Cicer arietinum] gi|502112410|ref|XP_004494322.1| chr1 57409399 57411939 -
3 domain predictions
2 GO terms
Lj1g3v4996180.1
n.a. FAD/NAD(P)-binding oxidoreductase family protein [Theobroma cacao] gi|508719141|gb|EOY11038.1| chr1 60675912 60679191 +
3 domain predictions
2 GO terms
Lj1g3v4996190.1
n.a. FAD/NAD(P)-binding oxidoreductase family protein [Theobroma cacao] gi|508719141|gb|EOY11038.1| chr1 60677477 60679357 +
2 domain predictions
2 GO terms
Lj2g3v0743120.1
n.a. PREDICTED: lysine-specific histone demethylase 1 homolog 1-like [Glycine max] gi|356529585|ref|XP_003533370.1| chr2 11760503 11763394 -
3 domain predictions
2 GO terms
Lj2g3v1012870.1
n.a. PREDICTED: L-aspartate oxidase-like [Cicer arietinum] gi|502090596|ref|XP_004489279.1| chr2 15426278 15429472 +
3 domain predictions
2 GO terms
Lj2g3v1012870.2
n.a. PREDICTED: L-aspartate oxidase-like [Cicer arietinum] gi|502090596|ref|XP_004489279.1| chr2 15426278 15430434 +
3 domain predictions
2 GO terms
Lj2g3v1012880.1
n.a. PREDICTED: L-aspartate oxidase 1-like [Glycine max] gi|356511664|ref|XP_003524543.1| chr2 15429761 15436271 +
3 domain predictions
2 GO terms
Lj2g3v1024280.1
n.a. FAD/NAD(P)-binding oxidoreductase family protein [Theobroma cacao] gi|508785740|gb|EOY32996.1| chr2 16351624 16358009 +
3 domain predictions
2 GO terms
Lj2g3v1024280.2
n.a. FAD/NAD(P)-binding oxidoreductase family protein [Theobroma cacao] gi|508785740|gb|EOY32996.1| chr2 16352119 16358009 +
3 domain predictions
2 GO terms
Lj2g3v1277760.1
n.a. (R)-mandelonitrile lyase [Medicago truncatula] gi|357487063|ref|XP_003613819.1| chr2 20442921 20446320 +
3 domain predictions
2 GO terms
Lj2g3v1550530.1
n.a. PREDICTED: long-chain-alcohol oxidase FAO4A-like [Glycine max] gi|356496483|ref|XP_003517097.1| chr2 24747750 24755478 +
3 domain predictions
2 GO terms
Lj2g3v1550540.1
n.a. n.a. chr2 24752701 24756033 -
3 domain predictions
2 GO terms
Lj2g3v1574220.1
n.a. PREDICTED: thioredoxin reductase 2-like [Cicer arietinum] gi|502161816|ref|XP_004512292.1| chr2 25107910 25114151 +
4 domain predictions
2 GO terms
Lj2g3v1575340.1
n.a. NADP-thioredoxin reductase A [Medicago truncatula] gi|111550245|gb|ABH10138.1| chr2 25167808 25167916 +
3 domain predictions
2 GO terms
Lj2g3v1575350.1
n.a. n.a. chr2 25167808 25167916 +
3 domain predictions
2 GO terms
Lj2g3v1633220.1
n.a. PREDICTED: rab proteins geranylgeranyltransferase component A-like [Glycine max] gi|356496561|ref|XP_003517135.1| chr2 25442380 25447620 -
3 domain predictions
2 GO terms
Lj2g3v1643260.1
n.a. PREDICTED: rab proteins geranylgeranyltransferase component A 2-like [Cicer arietinum] gi|502161729|ref|XP_004512265.1| chr2 25477072 25481972 +
3 domain predictions
2 GO terms
Lj2g3v1874610.1
n.a. PREDICTED: zeaxanthin epoxidase, chloroplastic-like [Cicer arietinum] gi|502152894|ref|XP_004509142.1| chr2 27923785 27930781 -
3 domain predictions
2 GO terms
Lj2g3v1989110.1
n.a. PREDICTED: zeaxanthin epoxidase, chloroplastic-like [Glycine max] gi|356495579|ref|XP_003516652.1| chr2 29749889 29753994 +
3 domain predictions
2 GO terms
Lj2g3v1989110.2
n.a. PREDICTED: zeaxanthin epoxidase, chloroplastic-like [Glycine max] gi|356495579|ref|XP_003516652.1| chr2 29749889 29753994 +
3 domain predictions
2 GO terms
Lj2g3v2002280.1
n.a. Flavin-containing monooxygenase FMO GS-OX5 [Medicago truncatula] gi|357481971|ref|XP_003611271.1| chr2 30244846 30249617 +
3 domain predictions
2 GO terms
Lj2g3v2002280.2
n.a. Flavin-containing monooxygenase FMO GS-OX5 [Medicago truncatula] gi|357481971|ref|XP_003611271.1| chr2 30244846 30249617 +
3 domain predictions
2 GO terms
Lj2g3v2279580.1
n.a. PREDICTED: alternative NAD(P)H dehydrogenase 2, mitochondrial-like isoform X1 [Cicer arietinum] gi|502096048|ref|XP_004490609.1| chr2 33309635 33315049 +
4 domain predictions
2 GO terms
Lj2g3v2971720.1
n.a. Geranylgeranyl reductase [Medicago truncatula] gi|357493579|ref|XP_003617078.1| chr2 38391366 38392446 -
3 domain predictions
2 GO terms