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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1874610 |
| Transcript ID | Lj2g3v1874610.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: zeaxanthin epoxidase, chloroplastic-like [Cicer arietinum] gi|502152894|ref|XP_004509142.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 80 | 80 | – | – | |
| PIRSF | 1 | 659 | 659 | 0 | ||
| PANTHER | 56 | 515 | 460 | 1.70E-232 | – | |
| PANTHER | 56 | 515 | 460 | 1.70E-232 | – | |
| Gene3D | 81 | 152 | 72 | 1.20E-36 | ||
| SUPERFAMILY | 81 | 256 | 176 | 1.99E-46 | ||
| Phobius | 81 | 99 | 19 | – | – | |
| PRINTS | 82 | 104 | 23 | 8.10E-16 | – | |
| Pfam | 82 | 253 | 172 | 2.10E-06 | ||
| Phobius | 100 | 659 | 560 | – | – | |
| Gene3D | 184 | 262 | 79 | 1.20E-36 | ||
| PRINTS | 235 | 250 | 16 | 8.10E-16 | – | |
| SUPERFAMILY | 352 | 451 | 100 | 1.99E-46 | ||
| Gene3D | 353 | 436 | 84 | 1.20E-36 | ||
| Pfam | 362 | 404 | 43 | 2.80E-07 | ||
| PRINTS | 365 | 380 | 16 | 8.10E-16 | – | |
| PRINTS | 380 | 396 | 17 | 8.10E-16 | – | |
| SUPERFAMILY | 524 | 638 | 115 | 1.51E-18 | ||
| CDD | 532 | 640 | 109 | 8.72E-21 | – | |
| Gene3D | 533 | 639 | 107 | 2.10E-16 | ||
| SMART | 557 | 608 | 52 | 1.20E-04 | ||
| Pfam | 558 | 630 | 73 | 6.60E-11 | ||
| ProSiteProfiles | 558 | 604 | 47 | 8.87 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Cellular component | Chloroplast | A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma. | ||
| Molecular function | Zeaxanthin epoxidase [overall] activity | Catalysis of the reactions: zeaxanthin + NAD(P)H + H+ + O2 = antheraxanthin + NAD(P)+ + H2O; and antheraxanthin + NAD(P)H + H+ + O2 = violaxanthin + NAD(P)+ + H2O. | ||
| Biological process | Abscisic acid biosynthetic process | The chemical reactions and pathways resulting in the formation of abscisic acid, 5-(1-hydroxy-2,6,6,trimethyl-4-oxocyclohex-2-en-1-y1)-3-methylpenta-2,4-dienoic acid. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. | ||
| Molecular function | FAD binding | Interacting selectively and non-covalently with the oxidized form, FAD, of flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes. |
Expression pattern of Lj2g3v1874610.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1874610.1, powered by CORGI.
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