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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR000185
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 6 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.382s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0312149.1
n.a. PREDICTED: protein translocase subunit SecA, chloroplastic-like isoform X3 [Cicer arietinum] gi|502117549|ref|XP_004495859.1| chr0 162912550 162920639 -
2 domain predictions
3 GO terms
Lj5g3v0321370.1
n.a. PREDICTED: protein translocase subunit SECA2, chloroplastic-like [Cicer arietinum] gi|502136002|ref|XP_004502527.1| chr5 3201959 3223533 +
4 domain predictions
3 GO terms
Lj5g3v0321370.2
n.a. PREDICTED: protein translocase subunit SECA2, chloroplastic-like [Cicer arietinum] gi|502136002|ref|XP_004502527.1| chr5 3201959 3224527 +
4 domain predictions
3 GO terms
LotjaGi1g1v0265900.1
n.a. Protein translocase subunit SecA; TAIR: AT1G21650.2 Preprotein translocase SecA family protein; Swiss-Prot: sp|D8WUA4|SECA2_ARATH Protein translocase subunit SECA2, chloroplastic; TrEMBL-Plants: tr|K7KUK2|K7KUK2_SOYBN Protein translocase subunit SecA; Found in the gene: LotjaGi1g1v0265900 LjG1.1_chr1 64962558 64985717 +
5 domain predictions
3 GO terms
LotjaGi5g1v0238000.1
n.a. Protein translocase subunit SecA; TAIR: AT4G01800.1 Albino or Glassy Yellow 1; Swiss-Prot: sp|Q41062|SECA_PEA Protein translocase subunit SecA, chloroplastic; TrEMBL-Plants: tr|G7IBQ7|G7IBQ7_MEDTR Protein translocase subunit SecA; Found in the gene: LotjaGi5g1v0238000 LjG1.1_chr5 54599848 54611603 -
2 domain predictions
3 GO terms
LotjaGi5g1v0238000.2
n.a. Protein translocase subunit SecA; TAIR: AT4G01800.1 Albino or Glassy Yellow 1; Swiss-Prot: sp|Q41062|SECA_PEA Protein translocase subunit SecA, chloroplastic; TrEMBL-Plants: tr|G7IBQ7|G7IBQ7_MEDTR Protein translocase subunit SecA; Found in the gene: LotjaGi5g1v0238000 LjG1.1_chr5 54599848 54611608 -
2 domain predictions
3 GO terms