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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR000702
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 15 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.681s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0012679.1
n.a. PREDICTED: 60S ribosomal protein L9-like [Cucumis sativus] gi|449438739|ref|XP_004137145.1| chr0 4812627 4812904 +
2 domain predictions
4 GO terms
Lj0g3v0091599.1
n.a. PREDICTED: 50S ribosomal protein L6, chloroplastic-like isoform 1 [Glycine max] gi|356559805|ref|XP_003548187.1| chr0 37947121 37949778 +
2 domain predictions
4 GO terms
Lj0g3v0176029.1
n.a. PREDICTED: 60S ribosomal protein L9-like [Cucumis sativus] gi|449438739|ref|XP_004137145.1| chr0 85014038 85014387 -
2 domain predictions
4 GO terms
Lj1g3v1091360.1
n.a. 60S ribosomal protein l9 [Medicago truncatula] gi|357490415|ref|XP_003615495.1| chr1 13765352 13766822 +
3 domain predictions
4 GO terms
Lj2g3v0360370.1
n.a. 60S ribosomal protein l9 [Medicago truncatula] gi|357490415|ref|XP_003615495.1| chr2 5782571 5782930 +
2 domain predictions
4 GO terms
Lj2g3v1415100.1
n.a. PREDICTED: 60S ribosomal protein L6, mitochondrial-like [Cucumis sativus] gi|449451529|ref|XP_004143514.1| chr2 22293018 22294612 +
2 domain predictions
4 GO terms
Lj4g3v1107380.3
n.a. PREDICTED: 60S ribosomal protein L9-like [Cucumis sativus] gi|449438739|ref|XP_004137145.1| chr4 16144253 16145870 +
2 domain predictions
4 GO terms
LotjaGi1g1v0127300.1
n.a. 50S ribosomal protein L6; TAIR: AT1G33120.1 Ribosomal protein L6 family; Swiss-Prot: sp|P30707|RL9_PEA 60S ribosomal protein L9; TrEMBL-Plants: tr|I3SAF6|I3SAF6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0127300 LjG1.1_chr1 20358257 20360475 +
3 domain predictions
4 GO terms
LotjaGi1g1v0127300.2
n.a. 50S ribosomal protein L6; TAIR: AT1G33120.1 Ribosomal protein L6 family; Swiss-Prot: sp|P30707|RL9_PEA 60S ribosomal protein L9; TrEMBL-Plants: tr|I3SAF6|I3SAF6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0127300 LjG1.1_chr1 20358402 20359971 +
3 domain predictions
4 GO terms
LotjaGi1g1v0301500.1
n.a. 50S ribosomal protein L6; TAIR: AT1G33120.1 Ribosomal protein L6 family; Swiss-Prot: sp|P30707|RL9_PEA 60S ribosomal protein L9; TrEMBL-Plants: tr|I3SAF6|I3SAF6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0301500 LjG1.1_chr1 73511163 73513803 +
3 domain predictions
4 GO terms
LotjaGi2g1v0143100.1
n.a. 50S ribosomal protein L6; TAIR: AT1G05190.1 Ribosomal protein L6 family; Swiss-Prot: sp|O23049|RK6_ARATH 50S ribosomal protein L6, chloroplastic; TrEMBL-Plants: tr|I1MPT8|I1MPT8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0143100 LjG1.1_chr2 51942826 51945497 -
2 domain predictions
4 GO terms
LotjaGi2g1v0143100.2
n.a. 50S ribosomal protein L6; TAIR: AT1G05190.1 Ribosomal protein L6 family; Swiss-Prot: sp|O23049|RK6_ARATH 50S ribosomal protein L6, chloroplastic; TrEMBL-Plants: tr|I1MPT8|I1MPT8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0143100 LjG1.1_chr2 51943156 51944565 -
3 domain predictions
4 GO terms
LotjaGi2g1v0322400.1
n.a. 50S ribosomal protein L6, putative; TAIR: AT2G18400.1 ribosomal protein L6 family protein; Swiss-Prot: sp|P26861|RM06_MARPO 60S ribosomal protein L6, mitochondrial; TrEMBL-Plants: tr|I3SVR1|I3SVR1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0322400 LjG1.1_chr2 79718580 79718888 +
2 domain predictions
4 GO terms
LotjaGi2g1v0322700.1
n.a. 50S ribosomal protein L6, putative; TAIR: AT2G18400.1 ribosomal protein L6 family protein; Swiss-Prot: sp|P26861|RM06_MARPO 60S ribosomal protein L6, mitochondrial; TrEMBL-Plants: tr|I3SVR1|I3SVR1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0322700 LjG1.1_chr2 79754853 79755161 +
2 domain predictions
4 GO terms
LotjaGi6g1v0283300.1
n.a. 50S ribosomal protein L6, putative; TAIR: AT2G18400.1 ribosomal protein L6 family protein; Swiss-Prot: sp|P26861|RM06_MARPO 60S ribosomal protein L6, mitochondrial; TrEMBL-Plants: tr|I3SVR1|I3SVR1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0283300 LjG1.1_chr6 59988425 59990191 -
2 domain predictions
4 GO terms