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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR000988
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 18 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 4.935s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0126879.1
n.a. PREDICTED: probable ribosome biogenesis protein RLP24-like [Glycine max] gi|356542711|ref|XP_003539809.1| chr0 57142783 57147890 +
5 domain predictions
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Lj1g3v0318410.1
n.a. PREDICTED: probable ribosome biogenesis protein RLP24-like [Glycine max] gi|356542711|ref|XP_003539809.1| chr1 3784246 3785719 +
5 domain predictions
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Lj1g3v0318410.2
n.a. PREDICTED: probable ribosome biogenesis protein RLP24-like [Glycine max] gi|356542711|ref|XP_003539809.1| chr1 3784246 3785719 +
5 domain predictions
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Lj2g3v1984090.1
n.a. PREDICTED: 60S ribosomal protein L24-like [Solanum lycopersicum] gi|460408062|ref|XP_004249467.1| chr2 28941255 28942458 +
5 domain predictions
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Lj4g3v2883310.1
n.a. PREDICTED: 60S ribosomal protein L24-like [Solanum lycopersicum] gi|460408062|ref|XP_004249467.1| chr4 38650215 38652430 +
5 domain predictions
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LotjaGi1g1v0175600.1
n.a. 60S ribosomal protein L24; TAIR: AT2G44860.1 Ribosomal protein L24e family protein; Swiss-Prot: sp|O22165|RLP24_ARATH Probable ribosome biogenesis protein RLP24; TrEMBL-Plants: tr|I3SQ61|I3SQ61_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0175600 LjG1.1_chr1 33623691 33626704 -
4 domain predictions
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LotjaGi1g1v0175600.2
n.a. 60S ribosomal protein L24; TAIR: AT2G44860.1 Ribosomal protein L24e family protein; Swiss-Prot: sp|O22165|RLP24_ARATH Probable ribosome biogenesis protein RLP24; TrEMBL-Plants: tr|I3SQ61|I3SQ61_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0175600 LjG1.1_chr1 33623691 33632047 -
4 domain predictions
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LotjaGi1g1v0175600.3
n.a. 60S ribosomal protein L24; TAIR: AT2G44860.1 Ribosomal protein L24e family protein; Swiss-Prot: sp|O22165|RLP24_ARATH Probable ribosome biogenesis protein RLP24; TrEMBL-Plants: tr|I3SQ61|I3SQ61_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0175600 LjG1.1_chr1 33625179 33626091 -
4 domain predictions
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LotjaGi1g1v0175800.1
n.a. 60S ribosomal protein L24; TAIR: AT2G44860.1 Ribosomal protein L24e family protein; Swiss-Prot: sp|O22165|RLP24_ARATH Probable ribosome biogenesis protein RLP24; TrEMBL-Plants: tr|I3SQ61|I3SQ61_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0175800 LjG1.1_chr1 33721420 33724454 +
4 domain predictions
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LotjaGi1g1v0175800.2
n.a. 60S ribosomal protein L24; TAIR: AT2G44860.1 Ribosomal protein L24e family protein; Swiss-Prot: sp|O22165|RLP24_ARATH Probable ribosome biogenesis protein RLP24; TrEMBL-Plants: tr|I3SQ61|I3SQ61_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0175800 LjG1.1_chr1 33722033 33722945 +
4 domain predictions
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LotjaGi2g1v0412900.1
n.a. 60S ribosomal L24; TAIR: AT2G36620.1 ribosomal protein L24; Swiss-Prot: sp|Q9FUL4|RL24_PRUAV 60S ribosomal protein L24; TrEMBL-Plants: tr|I3SVC9|I3SVC9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0412900 LjG1.1_chr2 90983161 90985042 +
4 domain predictions
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LotjaGi3g1v0173700_LC.1
n.a. 60S ribosomal protein L24; TAIR: AT2G44860.1 Ribosomal protein L24e family protein; Swiss-Prot: sp|O22165|RLP24_ARATH Probable ribosome biogenesis protein RLP24; TrEMBL-Plants: tr|I3SQ61|I3SQ61_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0173700_LC LjG1.1_chr3 24069270 24087756 +
4 domain predictions
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LotjaGi3g1v0173700_LC.2
n.a. 60S ribosomal protein L24; TAIR: AT2G44860.1 Ribosomal protein L24e family protein; Swiss-Prot: sp|O22165|RLP24_ARATH Probable ribosome biogenesis protein RLP24; TrEMBL-Plants: tr|I3SQ61|I3SQ61_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0173700_LC LjG1.1_chr3 24073556 24087756 +
4 domain predictions
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LotjaGi3g1v0173700_LC.3
n.a. 60S ribosomal protein L24; TAIR: AT2G44860.1 Ribosomal protein L24e family protein; Swiss-Prot: sp|O22165|RLP24_ARATH Probable ribosome biogenesis protein RLP24; TrEMBL-Plants: tr|I3SQ61|I3SQ61_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0173700_LC LjG1.1_chr3 24074410 24087908 +
4 domain predictions
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LotjaGi3g1v0173700_LC.4
n.a. 60S ribosomal protein L24; TAIR: AT2G44860.1 Ribosomal protein L24e family protein; Swiss-Prot: sp|O22165|RLP24_ARATH Probable ribosome biogenesis protein RLP24; TrEMBL-Plants: tr|I3SQ61|I3SQ61_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0173700_LC LjG1.1_chr3 24075428 24087908 +
4 domain predictions
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LotjaGi3g1v0173700_LC.6
n.a. 60S ribosomal protein L24; TAIR: AT2G44860.1 Ribosomal protein L24e family protein; Swiss-Prot: sp|O22165|RLP24_ARATH Probable ribosome biogenesis protein RLP24; TrEMBL-Plants: tr|I3SQ61|I3SQ61_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0173700_LC LjG1.1_chr3 24075428 24088817 +
4 domain predictions
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LotjaGi4g1v0419200.1
n.a. 60S ribosomal L24; TAIR: AT2G36620.1 ribosomal protein L24; Swiss-Prot: sp|Q9FUL4|RL24_PRUAV 60S ribosomal protein L24; TrEMBL-Plants: tr|I3SS30|I3SS30_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0419200 LjG1.1_chr4 79474160 79476977 -
4 domain predictions
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LotjaGi4g1v0419200.2
n.a. 60S ribosomal L24; TAIR: AT2G36620.1 ribosomal protein L24; Swiss-Prot: sp|Q9FUL4|RL24_PRUAV 60S ribosomal protein L24; TrEMBL-Plants: tr|I3SS30|I3SS30_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0419200 LjG1.1_chr4 79474993 79476749 -
4 domain predictions
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