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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001193
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 4 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.428s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0230449.1
n.a. PREDICTED: membrane-bound transcription factor site-2 protease-like [Glycine max] gi|356560965|ref|XP_003548756.1| chr0 119323320 119331795 +
3 domain predictions
3 GO terms
Lj0g3v0230449.2
n.a. PREDICTED: membrane-bound transcription factor site-2 protease-like [Glycine max] gi|356560965|ref|XP_003548756.1| chr0 119323320 119331795 +
2 domain predictions
3 GO terms
LotjaGi4g1v0149600.1
n.a. Protease m50 membrane-bound transcription factor site 2 protease, putative; TAIR: AT4G20310.4 Peptidase M50 family protein; Swiss-Prot: sp|F4JUU5|S2P_ARATH Membrane-bound transcription factor site-2 protease homolog; TrEMBL-Plants: tr|A0A0B2Q9W2|A0A0B2Q9W2_GLYSO Membrane-bound transcription factor site-2 protease; Found in the gene: LotjaGi4g1v0149600 LjG1.1_chr4 24533305 24544556 -
2 domain predictions
3 GO terms
LotjaGi4g1v0149600.2
n.a. Protease m50 membrane-bound transcription factor site 2 protease, putative; TAIR: AT4G20310.4 Peptidase M50 family protein; Swiss-Prot: sp|F4JUU5|S2P_ARATH Membrane-bound transcription factor site-2 protease homolog; TrEMBL-Plants: tr|A0A0B2Q9W2|A0A0B2Q9W2_GLYSO Membrane-bound transcription factor site-2 protease; Found in the gene: LotjaGi4g1v0149600 LjG1.1_chr4 24536057 24544528 -
3 domain predictions
3 GO terms