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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0230449 |
| Transcript ID | Lj0g3v0230449.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: membrane-bound transcription factor site-2 protease-like [Glycine max] gi|356560965|ref|XP_003548756.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 66 | 66 | – | – | |
| PANTHER | 32 | 537 | 506 | 8.90E-142 | ||
| PANTHER | 32 | 537 | 506 | 8.90E-142 | – | |
| Phobius | 67 | 89 | 23 | – | – | |
| TMHMM | 67 | 89 | 23 | – | – | |
| Phobius | 90 | 121 | 32 | – | – | |
| Phobius | 122 | 146 | 25 | – | – | |
| Pfam | 133 | 518 | 386 | 1.30E-14 | ||
| PRINTS | 140 | 154 | 15 | 6.30E-06 | ||
| Phobius | 147 | 157 | 11 | – | – | |
| TMHMM | 155 | 177 | 23 | – | – | |
| PRINTS | 156 | 171 | 16 | 6.30E-06 | ||
| Phobius | 158 | 178 | 21 | – | – | |
| Phobius | 179 | 197 | 19 | – | – | |
| TMHMM | 197 | 219 | 23 | – | – | |
| Phobius | 198 | 219 | 22 | – | – | |
| Phobius | 220 | 469 | 250 | – | – | |
| SUPERFAMILY | 225 | 267 | 43 | 3.46E-05 | ||
| Gene3D | 226 | 263 | 38 | 3.40E-05 | ||
| Phobius | 470 | 492 | 23 | – | – | |
| TMHMM | 470 | 492 | 23 | – | – | |
| Phobius | 493 | 515 | 23 | – | – | |
| Phobius | 516 | 533 | 18 | – | – | |
| TMHMM | 516 | 533 | 18 | – | – | |
| Phobius | 534 | 537 | 4 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Metalloendopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of Lj0g3v0230449.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0230449.1, powered by CORGI.
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