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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001197
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 14 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.367s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0338989.1
n.a. PREDICTED: 60S ribosomal protein L10-like [Cicer arietinum] gi|502136726|ref|XP_004502806.1| chr0 177568681 177570868 +
3 domain predictions
3 GO terms
Lj2g3v2173060.1
n.a. PREDICTED: 60S ribosomal protein L10-like [Glycine max] gi|356509104|ref|XP_003523292.1| chr2 32661298 32663629 -
3 domain predictions
3 GO terms
Lj2g3v2448200.1
n.a. PREDICTED: 60S ribosomal protein L10-like [Glycine max] gi|356500803|ref|XP_003519220.1| chr2 34594504 34596124 -
2 domain predictions
3 GO terms
LotjaGi1g1v0129500.1
n.a. Ribosomal protein; TAIR: AT1G26910.1 Ribosomal protein L16p/L10e family protein; Swiss-Prot: sp|Q9SPB3|RL10_VITRI 60S ribosomal protein L10; TrEMBL-Plants: tr|I3SEG3|I3SEG3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0129500 LjG1.1_chr1 20774417 20780508 +
4 domain predictions
3 GO terms
LotjaGi1g1v0129500.2
n.a. 50S ribosomal protein L16; TAIR: AT1G26910.2 Ribosomal protein L16p/L10e family protein; Swiss-Prot: sp|P93847|RL10_SOLME 60S ribosomal protein L10; TrEMBL-Plants: tr|I3SEG3|I3SEG3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0129500 LjG1.1_chr1 20775346 20776312 +
3 domain predictions
3 GO terms
LotjaGi1g1v0129500.3
n.a. 50S ribosomal protein L16; TAIR: AT1G26910.2 Ribosomal protein L16p/L10e family protein; Swiss-Prot: sp|Q9SPB3|RL10_VITRI 60S ribosomal protein L10; TrEMBL-Plants: tr|I3SEG3|I3SEG3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0129500 LjG1.1_chr1 20775346 20776544 +
2 domain predictions
3 GO terms
LotjaGi1g1v0129500.4
n.a. 60s ribosomal protein; TAIR: AT1G26910.2 Ribosomal protein L16p/L10e family protein; Swiss-Prot: sp|Q9SPB3|RL10_VITRI 60S ribosomal protein L10; TrEMBL-Plants: tr|I3SEG3|I3SEG3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0129500 LjG1.1_chr1 20775346 20776544 +
2 domain predictions
3 GO terms
LotjaGi1g1v0304700.1
n.a. Ribosomal protein; TAIR: AT1G26910.1 Ribosomal protein L16p/L10e family protein; Swiss-Prot: sp|Q9SPB3|RL10_VITRI 60S ribosomal protein L10; TrEMBL-Plants: tr|I3SEG3|I3SEG3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0304700 LjG1.1_chr1 74343504 74346300 +
4 domain predictions
3 GO terms
LotjaGi1g1v0304700.2
n.a. 50S ribosomal protein L16; TAIR: AT1G26910.2 Ribosomal protein L16p/L10e family protein; Swiss-Prot: sp|Q9SPB3|RL10_VITRI 60S ribosomal protein L10; TrEMBL-Plants: tr|A0A059A885|A0A059A885_EUCGR Uncharacterized protein; Found in the gene: LotjaGi1g1v0304700 LjG1.1_chr1 74344314 74345093 +
3 domain predictions
3 GO terms
LotjaGi1g1v0304700.3
n.a. 50S ribosomal protein L16; TAIR: AT1G26910.2 Ribosomal protein L16p/L10e family protein; Swiss-Prot: sp|Q9SPB3|RL10_VITRI 60S ribosomal protein L10; TrEMBL-Plants: tr|I3SEG3|I3SEG3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0304700 LjG1.1_chr1 74344314 74345570 +
2 domain predictions
3 GO terms
LotjaGi6g1v0045500.1
n.a. Ribosomal protein; TAIR: AT1G26910.1 Ribosomal protein L16p/L10e family protein; Swiss-Prot: sp|Q9SPB3|RL10_VITRI 60S ribosomal protein L10; TrEMBL-Plants: tr|I1MZN4|I1MZN4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0045500 LjG1.1_chr6 8492796 8501311 +
3 domain predictions
3 GO terms
LotjaGi6g1v0045500.2
n.a. Ribosomal protein; TAIR: AT1G66580.1 senescence associated gene 24; Swiss-Prot: sp|Q9SPB3|RL10_VITRI 60S ribosomal protein L10; TrEMBL-Plants: tr|F6GU72|F6GU72_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi6g1v0045500 LjG1.1_chr6 8494390 8495096 +
4 domain predictions
3 GO terms
LotjaGi6g1v0045500.3
n.a. Ribosomal protein; TAIR: AT1G26910.1 Ribosomal protein L16p/L10e family protein; Swiss-Prot: sp|P93847|RL10_SOLME 60S ribosomal protein L10; TrEMBL-Plants: tr|A0A067EUN1|A0A067EUN1_CITSI Uncharacterized protein; Found in the gene: LotjaGi6g1v0045500 LjG1.1_chr6 8494390 8495275 +
4 domain predictions
3 GO terms
LotjaGi6g1v0045500.4
n.a. Ribosomal protein; TAIR: AT1G66580.1 senescence associated gene 24; Swiss-Prot: sp|Q9SPB3|RL10_VITRI 60S ribosomal protein L10; TrEMBL-Plants: tr|W9RLX2|W9RLX2_9ROSA 60S ribosomal protein L10; Found in the gene: LotjaGi6g1v0045500 LjG1.1_chr6 8494390 8495275 +
4 domain predictions
3 GO terms