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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR002142
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 7 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 8.590s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0171639.1
n.a. PREDICTED: protease 4-like [Glycine max] gi|356562658|ref|XP_003549586.1| chr0 82271999 82279241 +
2 domain predictions
2 GO terms
Lj1g3v0579770.1
n.a. PREDICTED: protease 4-like [Cicer arietinum] gi|502086999|ref|XP_004488395.1| chr1 7265849 7280379 -
2 domain predictions
2 GO terms
LotjaGi1g1v0208400.1
n.a. signal peptide peptidase; TAIR: AT1G73990.1 signal peptide peptidase; Swiss-Prot: sp|Q9C9C0|SPPA1_ARATH Serine protease SPPA, chloroplastic; TrEMBL-Plants: tr|V7AXS8|V7AXS8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0208400 LjG1.1_chr1 45730071 45748319 +
3 domain predictions
2 GO terms
LotjaGi1g1v0208400.2
n.a. signal peptide peptidase; TAIR: AT1G73990.1 signal peptide peptidase; Swiss-Prot: sp|Q9C9C0|SPPA1_ARATH Serine protease SPPA, chloroplastic; TrEMBL-Plants: tr|A0A151RJH4|A0A151RJH4_CAJCA Protease 4 isogeny; Found in the gene: LotjaGi1g1v0208400 LjG1.1_chr1 45730330 45747384 +
3 domain predictions
2 GO terms
LotjaGi1g1v0208400.3
n.a. signal peptide peptidase; TAIR: AT1G73990.1 signal peptide peptidase; Swiss-Prot: sp|Q9C9C0|SPPA1_ARATH Serine protease SPPA, chloroplastic; TrEMBL-Plants: tr|V7AXS8|V7AXS8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0208400 LjG1.1_chr1 45741388 45747247 +
3 domain predictions
2 GO terms
LotjaGi1g1v0208400.4
n.a. signal peptide peptidase; TAIR: AT1G73990.1 signal peptide peptidase; Swiss-Prot: sp|Q9C9C0|SPPA1_ARATH Serine protease SPPA, chloroplastic; TrEMBL-Plants: tr|V7AXS8|V7AXS8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0208400 LjG1.1_chr1 45741531 45747247 +
3 domain predictions
2 GO terms
LotjaGi4g1v0258000.1
n.a. signal peptide peptidase; TAIR: AT1G73990.1 signal peptide peptidase; Swiss-Prot: sp|Q9C9C0|SPPA1_ARATH Serine protease SPPA, chloroplastic; TrEMBL-Plants: tr|A0A0R0F9M4|A0A0R0F9M4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0258000 LjG1.1_chr4 61354256 61362029 -
3 domain predictions
2 GO terms