Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0208400 |
| Transcript ID | LotjaGi1g1v0208400.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | signal peptide peptidase; TAIR: AT1G73990.1 signal peptide peptidase; Swiss-Prot: sp|Q9C9C0|SPPA1_ARATH Serine protease SPPA, chloroplastic; TrEMBL-Plants: tr|V7AXS8|V7AXS8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0208400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:45741388..45747247) extracted from Lotus japonicus Gifu genome v1.2.
TGCGTATTTTGGTGAGTTTGCATGTTTACCTGATCACTTTCTGGTATCATGAATCATGGTCATTATCTGATGTCATGCTC ATGGTCTGCAGGATGTGGAGAGAAATTCGACTTTTGGCTGCGTCAAAACCAGTCATTGCTTCAATGGCTGACGTGGCAGC AAGTGGAGGATACTACATGGCAATGGGAGCTCAAGCTATTGTCGCTGAAAGTCTTACCTTAACTGGTTCAATTGGAGTTG TCACAGGTAAACCAAGGTGTTTTACTTTTTCATTAGGCGAAAAGAGGAGAGCATGTGGATACGATAATATATCTGAAACT AAAAATATAGATTTATTGATAACAAGAATGCACATGTTGGAATATTTGAAACAGCTGTTCTCATCTGTTCCATGTGCCAA TCTAATTGGTAGTGCTCAATTCAATAATTAGGAAACTCCTAAGCAGGCCCCCAAGCAAAAAATGACAGAACTAGCATAGA CTTAGAGTAGAGTTTGATAGAATAAGGTAAGAAACTTGTATTAGTGAATCGTTAATTCCCAATGCCCTTGGTAGAAATTT CAAAAATTTCTGAAATTAAGGACATGATTTCTAAAACTCAATTAGTTATGCGACACATGAAAAATTCATATATAACTTCC TCTCGAGTTCAAAATTTTATTTGAGCTCATTGAAATTCATAATCTCAAAGAAACGACACAATGGAGTTAATTCTAGTGAA ATTGTTATATAACACAAAAGTCGATAGGCGTAAATGGAATTATTTTACTACTTTTACTCTAATTTTCAACATAATACTAT AGTATTTTGAAGTTGTTATGATGAAGAAAGATATAACAGTGTATGACTTTGTGTTATAGATTAAATGGGAAATTGTATGC AATCAAAGGAAATTGTAGCTGAAATCAAAATTATTTATTATAGTTGAAATAATTAGGCAAGACATTAACCGTGAACCGTC GGTTCTTAATGTTTTGTTCTTCGATTTTGTAGTTTGTTAATTTATAACATAACATCTCTTCTTGTAGGAAAATTTAACCT AGAGAAACTGTATGAGAAGATTGGCTTTAACAAAGAAATCATATCAAGAGGAAGATATGCTGAGGTTCTTGCTGCTGAAC AACGCCCTTTTAGGTAATACTATTTCTTTATTTTCAGGTATAAAGATTCTAGTAGATCAAGAGAGAATATTAGGCAGTGT AGTATGCCAATGAATATCTCAGTTTCTAGGCACTCCCTTTTTAGAAAGAAGGCATTGCTGTCACTTTCTAACTAGTAAGT TTCGTGCAATGCATGCCTTTTTTTTAAAGCAAAAGTTGAATTATTATTCAAAGAAGCTGGGGACAAATCCCCAGATGAGA GATCAAAAGACACAACCTCACCTGATTACAAAACGGAGCACCAGAAAACCACCCCAGAAAGAACCAACCAGCAAAAAAGT ACCAGATAACAAACAGGATCAGAGAAAAAGACAAGTCCCACCAAGATATAATACAAAAGGGAACCAAAAACCAAAAAGCA GACAAAACAAACCAACTTTCTAAAATTACCCCCAAGAAATATCACCACAAAACTCCATCCCACAAATAACTCATGATGCT AGCAGGTAAAAGCCTCCCTAAATTCTTCCTCCAACCCATGAATAGCTTCTAAATCTAATATGCCCCAAGATGATTAAAGG GCTGAAAGGAATCGTCTAGGAATTGGTCTTTGCTAGAAAAACTCAGTAAAGAAAGGAAGGTGTTGGTCCTGAAACATGCT AAGGCTGGAATTGGAAAGGAAGGTGTAGGTCTTGATGAAATGGAAGGTGAAGACGTCACACAAAAGAGATGACAATCCTT TGTAAATCAGTTTTCTTGAATCACTCAAGAACCAAGAGAATCACTCTCAAGAATTGAATTTGAAAACTCAGAAAAACTAT TATTTATAAACTGATTATTACAATGGTCACATTTGCCTTTTACAGGAGAATTTCCAGCCTAGAGCAAAATATGATTAAGT CTTACAAAGAGAGAATCCTAGGCTGTGTTAACACAAAATAAAAGAAAATTATGGCCCTTTGACCAGCTCTTGGACGTGTG GAGGCTGAAAGCTTTCCATGTTGAATGTTCTTCATGACTAGGGAACCACACTCTTCATGCCCGTTATTCCCTTTGTCTCT TGTAACTCCTCCTTTAGCCTTGAAAGCTCTTATTTCCTTTGTCTATTGTTGATTCAAATTCAAACCTTCAGCAGTTGTTC ACCTTCAATCCTTCTTGGCGGTCATTGTTGACTAATTCAAACCACACAAAGAGTTTTTAGTGAGAAATGGGCCCCCCTTG GCTCTTATGCTCCCCAAACACCACTAGAGTATATTAAACACACCAAAAGAAAAACAATTCAGAAACTTAGTGCTTTTGGA CCCAACTAAATCCATTGGTCACCTGCACTTTTATTCAGTTCAAATAAACTGAAAATACGAGGGCTAGAACCAAAAAGCCC AAAAGGCCCTTTAGCGAGTGCTGGCAACAATTCTTGAAGTTGGAGTCAATTTGGAAGATGTGACGGTACCAAAGCCCATG ATGATCATTCAAGCACAAGAATGGGCCCCAACCCCATTCAACGTCTAAGGGCTTCCATGTTTTTTAGTTTATTTGAATTG AATAAAAGTGCAGGTGACCAATTGATTTAGCTGGGTTCAAAAGCACTAAGTTTCTGAATTGTTTTTCTTTTGGTGTGTTT AATTCACTTTAAGTGGTTTTTGGGGCGCATAAAAGCCAAGGGGTCATTCCTCTCTAAAAACTCTTGGGGTTTGAATAAAT CAACAATGGCTGCCAAGAAGGATTGAAGCTGAACAATTGCTGAAAGGTTGAATTTGAATCAGCAATAGACAAAGGAAATA AGAGCTTTTAAGGCTAAAGGAGGAGTTACAAGAGACAAAGGGAATAAAGGGCATGGAGAGCATTAAATGTGTGGTTCCCT AGTCATGAAGAGCATTCAACATGAAAAGCTTTCAGCCTCCACACACCCAAGAGCTTGCCAATGGGCCATAATTTTCTTTT ATTTTGTGTTAATAACACAGCCTAGGATTCTCTCTTTGTGAGACTCAGTCATATTTTGCTCTAGGCTGGAAATTCTGCTT TAAATGGCACATGTGACCGTTGTTCATGAATAATATTGTTTTTCTGAGTTTTCAAATTCAATTCTTGAGAGTAATTTTCT TGGTTCTTGAGTGATTCAAGAAAACTGACTTAGCAAAGGATTGCCATCTCTTGTGTGACAGCTATACCTTCCATTTCATC AAGACCTACACCTTCCTTTCCAATTCCAGCAGTAGCACGTTTCAGGACCAAAAGCTTCCTTTCTTTTCTGAGTTTTTCTG GCAAAGACCAATTCCTAGACGATCCCTTTCAGCCCTTTAATCATCATGGCGCATACTCAAGTCCCAAAAACTTATCAACT AGCCAAGCCTTTTTAGCTCTAGTAAAATAGCCACAGTGGAATCCACACCTGTAAGCAATGGAGTGGCCACAGACGGAGCA CTCCCCTCCTCCGGCATACCCAAATAAGAATGGTATCACAATATCGTTCCAGCCAGTTAATTTACTAACCAGAAACAAAA ACTTCAAGAAAACTCAGAAATCATGCAACATATTCCACAATATGATACAAATGCTATAGAACAAGTACTATGTACCAATT ACCCCAATTCAATAAAAAGCCCCAAATTGATCAAACCCTAAAACAGGAACATGCAAGAATATAAGAGATAGGGTTGAAGA AGATCACGCCAGAGATTTATACTGGTTCACCTCCAACAGTTTGGTAGGAGGCTACATCCAGTCCCTGTCATGGCGGTTAG AGTTCACTATGATAAGAATTCAAATACACAGCTCACACCGAGTACTCTTGAATTTCCTAACCCAATACAAACCATGCAAG AACCCTACTTACACCACTCACCACACCCTTTGGTGAACCCAATTCCACGAATTGAATCAAGATGAAGAATAATTTTCGCA GCAAAGGTGATCTAATTCCCAAAAACTTGAGAGTAGAAAACCATATGAAAAAATACATAGACTCATGATAACTCTTGCTC TCAATCTGAAAATAAAAGTTTGTATATTGTTTTGCTCTTTGCACTAGTGGAAAACCTTCTAAAGAGTGTTAGAAAGCCCA TGAAATTTGAGATCAAAGACCCAAGTTTGAGAAAAAACATACAAACAACCCTTTCGCGCACAAGTGCTGAAAACACATGT TTTAAGAACACAGCAGTATGGGTAAATTGATTCACAGCCCGTGTTAATCGATTTACTAAAGTTGAGTTAACAGGATACCA GAACCTGTTAATCTATTAACCAAACTTGCTGTCTTTTCTATGAAAAAACCTTTAAAACTCAATTTTTAAAGCATTTTTCC TAAGGGTTTCTAATTCTTTTAAGTTTGAAAACATTCCACTATATTAAGAGACACTTAAATAGAGATTAGAGAGCTATTAC CATGAAATTTTGATGTGTTCTATGCTAAATGAAAACCTATGCTAGAAAGCATAAAATTGCAAGAATTAAACTAATTATTA CAACTTCAAGCTTGAGATTCTTATTCCTTTTTCTTCTTTGTCGGTGTTATCATAAAAACTTAGCCAGAGTCCATGTTGGA GTACTTCTTCACAAATATCACTTAAAGTTCCTCAATATATGAAAGCTGACTGTGGCAAGTAAGTCCACTAAGCAATGAAC AATGAACAATCTATTTGACCCTCTAGGAACCATAAGAATAACATAAGGAATCCCAGAGTTTCGGCACCCATCTATGCATT AAATCTTTCAGTAGTTGCCCTTTACAGGGTTGGTATCTATTGTCTCACACTATCCGTACATATTTGACTTGCGGGACAGA CAAATGTGAATATTTTTTAATTTCTTTCTTCATTTTTGGATGTAGACCAGATGAAGCAGCACTATTTGCCAAATCTGCAC AACATGCTTATAAACAATTTCGAGACAAGGCAGCTTTATCCAGATCAATGGCTGTATGTTTTAAATTTTATATGCCAATT CCGTGCTTTTTGTTCATTCTTCTTGTAGATCTTTGTTACTTACGATCAAGGTTGTCAGACTCGTGAGTCTAAGCAGACTC GTTTTGGGTAGGTAGACTCGACTCGTAGACTCGACGAGACTCGAGTCTACCAGAAATGAAAATTTACTAAGTATAACCTT GTCACATGAAGAATAAATACAAACATATAATCTAATTATAAGAGCATCCAAGATTTTTTGAAGCAAAGAAGCAAGAGGAA CGCGATAGAGGTTGAAAATAGGTTTAGTTTTAGGGATTTTTAATAAATTTGGGATTTTTTAACTTAAAAAAAAAAAAAAC TTGACTCGGTCACCGAGTCAGACCGAGTCAGGCCGAGTCAGGCCGAGTCAGACCGAGTCAGACCGAGTCAGGCCAGAAAA CGAGTCTGACAGCGAGTCGACTCGTTTTTCCTATGTAGACTCGCGAGTCTAACAACCTTGCTTACGATTATTATTCTGTA ACTAGGTTGATAAGATGGAGGAGGTGGCCCAAGGGAGGGTTTGGACTGGTAAAGATGCAGCTTCACATGGTTTGGTTGAT GCTCTTGGTGGGCTTTCACGTGCTATTGCCATAGCGAAATTGAAGGCCAATATTCCTCAAGACAGTCAGGTTTTTTTCTT AGATCACCTCTATTAGTTTGGCAATACCAATTTTGTTCTTGAGAAGTTCAGTTGTGAAATTAATGACTGTGCTCGAGTTC TTCCAGGTCACTGTGGTGGAGATCTCCAGAACCAGCCCTTCCCTACCTGGGATTTTGTTAGGCGTAGGGAGTTCCCTCGT AGGAGTGGATAGAACATTGA
CDS sequence (LotjaGi1g1v0208400.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTGGAGAGAAATTCGACTTTTGGCTGCGTCAAAACCAGTCATTGCTTCAATGGCTGACGTGGCAGCAAGTGGAGGATA CTACATGGCAATGGGAGCTCAAGCTATTGTCGCTGAAAGTCTTACCTTAACTGGTTCAATTGGAGTTGTCACAGGAAAAT TTAACCTAGAGAAACTGTATGAGAAGATTGGCTTTAACAAAGAAATCATATCAAGAGGAAGATATGCTGAGGTTCTTGCT GCTGAACAACGCCCTTTTAGACCAGATGAAGCAGCACTATTTGCCAAATCTGCACAACATGCTTATAAACAATTTCGAGA CAAGGCAGCTTTATCCAGATCAATGGCTGTTGATAAGATGGAGGAGGTGGCCCAAGGGAGGGTTTGGACTGGTAAAGATG CAGCTTCACATGGTTTGGTTGATGCTCTTGGTGGGCTTTCACGTGCTATTGCCATAGCGAAATTGAAGGCCAATATTCCT CAAGACAATTGA
Protein sequence (LotjaGi1g1v0208400.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MWREIRLLAASKPVIASMADVAASGGYYMAMGAQAIVAESLTLTGSIGVVTGKFNLEKLYEKIGFNKEIISRGRYAEVLA AEQRPFRPDEAALFAKSAQHAYKQFRDKAALSRSMAVDKMEEVAQGRVWTGKDAASHGLVDALGGLSRAIAIAKLKANIP QDN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 157 | 157 | 6.2E-61 | – | |
| PANTHER | 1 | 162 | 162 | 5.9E-81 | – | |
| CDD | 1 | 154 | 154 | 1.97444E-60 | ||
| SUPERFAMILY | 6 | 145 | 140 | 1.47E-21 | ||
| Pfam | 8 | 158 | 151 | 5.3E-42 | ||
| Gene3D | 48 | 115 | 68 | 6.2E-61 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. | ||
| Molecular function | Peptidase activity | Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid. |
Expression pattern of LotjaGi1g1v0208400.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…