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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR003441
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 211 results. Now displaying 1 of 5 with 50 rows per page. This search has taken 5.481s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0099329.1
n.a. transcription factor NAC [Lotus japonicus] gi|193237579|dbj|BAG50066.1| chr0 42114133 42114433 +
4 domain predictions
2 GO terms
Lj0g3v0102869.1
n.a. PREDICTED: NAC domain-containing protein 8-like isoform X1 [Cicer arietinum] gi|502142771|ref|XP_004505101.1| chr0 43798724 43801724 +
4 domain predictions
2 GO terms
Lj0g3v0103979.1
n.a. PREDICTED: NAC domain-containing protein 78-like [Glycine max] gi|356571593|ref|XP_003553961.1| chr0 44423872 44424784 +
4 domain predictions
2 GO terms
Lj0g3v0109969.1
n.a. NAC domain protein, IPR003441 isoform 1 [Theobroma cacao] gi|508777173|gb|EOY24429.1| chr0 47672701 47675564 -
4 domain predictions
2 GO terms
Lj0g3v0151399.1
n.a. NAC domain protein [Medicago truncatula] gi|357439789|ref|XP_003590172.1| chr0 70518854 70519321 +
4 domain predictions
2 GO terms
Lj0g3v0171479.1
n.a. PREDICTED: NAC domain-containing protein 100-like [Glycine max] gi|356512034|ref|XP_003524726.1| chr0 82204397 82206344 -
4 domain predictions
2 GO terms
Lj0g3v0184459.1
n.a. NAC domain protein, IPR003441 [Populus trichocarpa] gi|224124996|ref|XP_002329865.1| chr0 89656346 89658794 +
4 domain predictions
2 GO terms
Lj0g3v0187859.1
n.a. NAC domain protein [Medicago truncatula] gi|357491761|ref|XP_003616168.1| chr0 91666404 91668308 +
4 domain predictions
2 GO terms
Lj0g3v0192469.1
n.a. PREDICTED: NAC transcription factor 25-like [Cicer arietinum] gi|502106606|ref|XP_004492996.1| chr0 94108352 94109631 +
4 domain predictions
2 GO terms
Lj0g3v0198369.1
n.a. PREDICTED: NAC domain-containing protein 7-like [Glycine max] gi|356515378|ref|XP_003526377.1| chr0 96732033 96733186 +
4 domain predictions
2 GO terms
Lj0g3v0198619.1
n.a. PREDICTED: NAC domain-containing protein 2-like [Glycine max] gi|356519556|ref|XP_003528438.1| chr0 96990255 96992455 +
4 domain predictions
2 GO terms
Lj0g3v0223189.1
n.a. NAC domain protein [Medicago truncatula] gi|357453161|ref|XP_003596857.1| chr0 114971913 114975084 -
4 domain predictions
2 GO terms
Lj0g3v0223189.2
n.a. NAC domain protein [Medicago truncatula] gi|357453161|ref|XP_003596857.1| chr0 114971913 114975084 -
4 domain predictions
2 GO terms
Lj0g3v0296049.1
n.a. PREDICTED: protein CUP-SHAPED COTYLEDON 2-like [Glycine max] gi|356546856|ref|XP_003541838.1| chr0 153840141 153841833 +
4 domain predictions
2 GO terms
Lj0g3v0297209.1
n.a. PREDICTED: NAC domain-containing protein 8-like [Glycine max] gi|356545011|ref|XP_003540939.1| chr0 154423107 154425667 +
4 domain predictions
2 GO terms
Lj0g3v0320919.1
n.a. PREDICTED: NAC domain-containing protein 78-like [Glycine max] gi|356571593|ref|XP_003553961.1| chr0 167501161 167502982 +
4 domain predictions
2 GO terms
Lj0g3v0320969.1
n.a. PREDICTED: protein SOMBRERO-like [Glycine max] gi|356525718|ref|XP_003531470.1| chr0 167538584 167541268 -
4 domain predictions
2 GO terms
Lj0g3v0346819.1
n.a. NAC domain protein NAC3 [Glycine max] gi|351721476|ref|NP_001238234.1| chr0 181928493 181930146 -
4 domain predictions
2 GO terms
Lj0g3v0349249.1
n.a. NAC domain protein, IPR003441 [Theobroma cacao] gi|508775653|gb|EOY22909.1| chr0 183344933 183345392 -
4 domain predictions
2 GO terms
Lj0g3v0352409.1
n.a. PREDICTED: NAC domain-containing protein 42-like [Glycine max] gi|356567447|ref|XP_003551931.1| chr0 185349833 185352831 +
4 domain predictions
2 GO terms
Lj0g3v0352409.2
n.a. PREDICTED: NAC domain-containing protein 42-like [Glycine max] gi|356567447|ref|XP_003551931.1| chr0 185349833 185352831 +
4 domain predictions
2 GO terms
Lj0g3v0353129.1
n.a. PREDICTED: NAC transcription factor 25-like [Cicer arietinum] gi|502106606|ref|XP_004492996.1| chr0 185805229 185806159 +
4 domain predictions
2 GO terms
Lj0g3v0355209.1
n.a. PREDICTED: NAC transcription factor 25-like [Cicer arietinum] gi|502106606|ref|XP_004492996.1| chr0 187121945 187122763 +
4 domain predictions
2 GO terms
Lj1g3v0765580.1
n.a. PREDICTED: NAC domain-containing protein 7-like isoform X1 [Cicer arietinum] gi|502118164|ref|XP_004496131.1| chr1 9963491 9970580 +
4 domain predictions
2 GO terms
Lj1g3v0826050.1
n.a. PREDICTED: NAC domain-containing protein 2-like [Cicer arietinum] gi|502135863|ref|XP_004502479.1| chr1 10740633 10742625 +
4 domain predictions
2 GO terms
Lj1g3v1091120.1
n.a. NAC domain-containing protein [Medicago truncatula] gi|357464263|ref|XP_003602413.1| chr1 13655395 13676663 -
4 domain predictions
2 GO terms
Lj1g3v1091120.2
n.a. NAC domain-containing protein [Medicago truncatula] gi|357464261|ref|XP_003602412.1| chr1 13656331 13661117 -
4 domain predictions
2 GO terms
Lj1g3v1091120.3
n.a. NAC domain-containing protein [Medicago truncatula] gi|357464261|ref|XP_003602412.1| chr1 13672184 13676663 -
4 domain predictions
2 GO terms
Lj1g3v1304790.1
n.a. PREDICTED: NAC domain-containing protein 78-like isoform X1 [Cicer arietinum] gi|502137009|ref|XP_004502931.1| chr1 15723554 15726920 +
4 domain predictions
2 GO terms
Lj1g3v1304790.2
n.a. PREDICTED: NAC domain-containing protein 78-like isoform X2 [Cicer arietinum] gi|502137011|ref|XP_004502932.1| chr1 15723554 15726920 +
4 domain predictions
2 GO terms
Lj1g3v1306810.1
n.a. transcription factor NAC [Lotus japonicus] gi|193237579|dbj|BAG50066.1| chr1 15731796 15733121 +
4 domain predictions
2 GO terms
Lj1g3v1318190.1
n.a. PREDICTED: NAC domain-containing protein 78-like [Glycine max] gi|356525677|ref|XP_003531450.1| chr1 15945400 15949182 +
4 domain predictions
2 GO terms
Lj1g3v1341630.1
n.a. PREDICTED: NAC domain-containing protein 19 [Glycine max] gi|356508965|ref|XP_003523223.1| chr1 16068852 16070434 -
4 domain predictions
2 GO terms
Lj1g3v2035130.1
n.a. PREDICTED: NAC domain-containing protein 100-like [Glycine max] gi|356509990|ref|XP_003523724.1| chr1 23826918 23829532 -
4 domain predictions
2 GO terms
Lj1g3v3329880.1
n.a. NAC domain protein [Glycine max] gi|351724343|ref|NP_001238078.1| chr1 37851980 37853357 +
4 domain predictions
2 GO terms
Lj1g3v3402230.1
n.a. PREDICTED: protein CUP-SHAPED COTYLEDON 3-like [Glycine max] gi|356509576|ref|XP_003523523.1| chr1 39194626 39201964 -
4 domain predictions
2 GO terms
Lj1g3v3402230.2
n.a. PREDICTED: protein CUP-SHAPED COTYLEDON 3-like [Glycine max] gi|356509576|ref|XP_003523523.1| chr1 39194626 39201964 -
4 domain predictions
2 GO terms
Lj1g3v3668860.1
n.a. PREDICTED: NAC domain-containing protein 8-like [Cicer arietinum] gi|502126672|ref|XP_004499395.1| chr1 42304851 42309730 -
4 domain predictions
2 GO terms
Lj1g3v3892210.1
n.a. PREDICTED: NAC transcription factor 25-like [Cicer arietinum] gi|502106606|ref|XP_004492996.1| chr1 44789615 44790597 +
4 domain predictions
2 GO terms
Lj1g3v3892240.1
n.a. PREDICTED: NAC transcription factor 25-like [Cicer arietinum] gi|502106606|ref|XP_004492996.1| chr1 44802267 44803637 +
4 domain predictions
2 GO terms
Lj1g3v3948170.1
n.a. transcriptional factor NAC11 [Glycine max] gi|351727585|ref|NP_001236142.1| chr1 46278651 46280817 +
4 domain predictions
2 GO terms
Lj1g3v3948230.1
n.a. PREDICTED: NAC domain-containing protein 100-like [Glycine max] gi|356571678|ref|XP_003554001.1| chr1 46307943 46310633 +
4 domain predictions
2 GO terms
Lj1g3v4515470.1
n.a. PREDICTED: NAC domain-containing protein 21/22-like [Cicer arietinum] gi|502110053|ref|XP_004493788.1| chr1 52912331 52921352 -
4 domain predictions
2 GO terms
Lj1g3v4579400.1
n.a. NAC domain transcription factor [Medicago truncatula] gi|357510635|ref|XP_003625606.1| chr1 54585246 54587340 -
4 domain predictions
2 GO terms
Lj2g3v0621660.1
n.a. PREDICTED: NAC domain-containing protein 74-like [Glycine max] gi|356561847|ref|XP_003549188.1| chr2 8785290 8789421 +
4 domain predictions
2 GO terms
Lj2g3v0727360.1
n.a. NAC domain protein [Medicago truncatula] gi|357500383|ref|XP_003620480.1| chr2 11510358 11514431 -
4 domain predictions
2 GO terms
Lj2g3v0896450.1
n.a. NAC domain containing protein 75 isoform 1 [Theobroma cacao] gi|508783335|gb|EOY30591.1| chr2 13709519 13714685 -
4 domain predictions
2 GO terms
Lj2g3v0896450.2
n.a. NAC domain containing protein 75 isoform 1 [Theobroma cacao] gi|508783335|gb|EOY30591.1| chr2 13709519 13714829 -
4 domain predictions
2 GO terms
Lj2g3v0921510.1
n.a. PREDICTED: NAC domain-containing protein 8-like [Glycine max] gi|356513971|ref|XP_003525681.1| chr2 14635507 14640175 +
4 domain predictions
2 GO terms
Lj2g3v1058050.1
n.a. PREDICTED: protein FEZ-like [Glycine max] gi|356550964|ref|XP_003543850.1| chr2 16779390 16782398 +
4 domain predictions
2 GO terms