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| Field | Value |
|---|---|
| Gene ID | Lj1g3v1091120 |
| Transcript ID | Lj1g3v1091120.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | NAC domain-containing protein [Medicago truncatula] gi|357464261|ref|XP_003602412.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 299 | 299 | 1.20E-164 | – | |
| PANTHER | 1 | 299 | 299 | 1.20E-164 | – | |
| Phobius | 1 | 573 | 573 | – | – | |
| SUPERFAMILY | 11 | 166 | 156 | 7.19E-59 | ||
| ProSiteProfiles | 16 | 166 | 151 | 55.714 | ||
| Pfam | 17 | 142 | 126 | 4.90E-26 | ||
| PANTHER | 325 | 475 | 151 | 1.20E-164 | – | |
| PANTHER | 325 | 475 | 151 | 1.20E-164 | – | |
| MobiDBLite | 526 | 545 | 20 | – | – | |
| Phobius | 574 | 595 | 22 | – | – | |
| TMHMM | 576 | 595 | 20 | – | – | |
| Phobius | 596 | 596 | 1 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
Expression pattern of Lj1g3v1091120.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v1091120.3, powered by CORGI.
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