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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR003614
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We have found 8 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.913s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0253209.1
n.a. defensin precursor [Vigna unguiculata] gi|225548306|gb|ACN93800.1| chr0 131489704 131490477 +
4 domain predictions
1 GO term
Lj0g3v0276939.1
n.a. Scorpion toxin-like knottin superfamily protein [Theobroma cacao] gi|508712956|gb|EOY04853.1| chr0 143732688 143734307 -
4 domain predictions
1 GO term
Lj1g3v1382030.1
n.a. PREDICTED: defensin-like protein 6-like [Glycine max] gi|356516435|ref|XP_003526900.1| chr1 16763105 16763734 +
4 domain predictions
1 GO term
Lj3g3v0720000.1
n.a. PREDICTED: defensin-like protein 19-like [Cicer arietinum] gi|502155954|ref|XP_004510254.1| chr3 8111256 8111934 -
4 domain predictions
1 GO term
Lj4g3v2858510.1
n.a. Scorpion toxin-like knottin superfamily protein [Theobroma cacao] gi|508712956|gb|EOY04853.1| chr4 38230911 38231548 +
4 domain predictions
1 GO term
LotjaGi1g1v0328600_LC.1
n.a. Defensin-like family protein; TAIR: AT5G63660.1 Scorpion toxin-like knottin superfamily protein; Swiss-Prot: sp|Q9FFP8|DEF06_ARATH Defensin-like protein 6; TrEMBL-Plants: tr|A0A061EJM1|A0A061EJM1_THECC Scorpion toxin-like knottin superfamily protein; Found in the gene: LotjaGi1g1v0328600_LC LjG1.1_chr1 78335744 78336897 +
2 domain predictions
1 GO term
LotjaGi3g1v0086300_LC.1
n.a. Defensin-like protein; TAIR: AT1G19610.1 defensin-like protein; Swiss-Prot: sp|P82787|DEF19_ARATH Defensin-like protein 19; TrEMBL-Plants: tr|A0A072TL50|A0A072TL50_MEDTR Defensin-like protein; Found in the gene: LotjaGi3g1v0086300_LC LjG1.1_chr3 9745047 9746226 +
3 domain predictions
1 GO term
LotjaGi6g1v0237300.1
n.a. Defensin fusion; TAIR: AT5G38330.1 low-molecular-weight cysteine-rich 80; Swiss-Prot: sp|P82789|DF181_ARATH Defensin-like protein 181; TrEMBL-Plants: tr|I3SJZ1|I3SJZ1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0237300 LjG1.1_chr6 54718872 54719505 -
2 domain predictions
1 GO term