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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR003657
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 184 results. Now displaying 1 of 4 with 50 rows per page. This search has taken 6.019s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0013729.1
n.a. PREDICTED: WRKY transcription factor 6-like [Glycine max] gi|356524283|ref|XP_003530759.1| chr0 5197124 5199932 -
6 domain predictions
3 GO terms
Lj0g3v0043059.1
n.a. PREDICTED: WRKY transcription factor 6 [Glycine max] gi|356547095|ref|XP_003541953.1| chr0 14146871 14149760 +
6 domain predictions
3 GO terms
Lj0g3v0058429.1
n.a. PREDICTED: probable WRKY transcription factor 28-like [Glycine max] gi|356553607|ref|XP_003545146.1| chr0 19212352 19215258 +
6 domain predictions
3 GO terms
Lj0g3v0067609.1
n.a. PREDICTED: probable WRKY transcription factor 72-like [Cicer arietinum] gi|502152108|ref|XP_004508768.1| chr0 24050728 24054337 +
6 domain predictions
3 GO terms
Lj0g3v0074419.1
n.a. WRKY transcription factor [Medicago truncatula] gi|357437277|ref|XP_003588914.1| chr0 28011041 28012295 -
6 domain predictions
3 GO terms
Lj0g3v0079069.1
n.a. PREDICTED: probable WRKY transcription factor 70-like [Glycine max] gi|356516231|ref|XP_003526799.1| chr0 30496033 30499111 -
6 domain predictions
3 GO terms
Lj0g3v0130569.1
n.a. WRKY transcription factor [Medicago truncatula] gi|357437105|ref|XP_003588828.1| chr0 59245242 59246292 -
6 domain predictions
3 GO terms
Lj0g3v0162929.1
n.a. PREDICTED: LOW QUALITY PROTEIN: probable WRKY transcription factor 15-like [Glycine max] gi|356562255|ref|XP_003549387.1| chr0 76924420 76926847 -
6 domain predictions
3 GO terms
Lj0g3v0179799.1
n.a. PREDICTED: probable WRKY transcription factor 69-like [Cicer arietinum] gi|502083846|ref|XP_004487582.1| chr0 87354150 87357092 -
6 domain predictions
3 GO terms
Lj0g3v0191969.1
n.a. WRKY48 protein [Glycine max] gi|351721783|ref|NP_001237221.1| chr0 93806022 93806727 +
2 domain predictions
3 GO terms
Lj0g3v0208309.1
n.a. PREDICTED: probable WRKY transcription factor 33 [Glycine max] gi|356495083|ref|XP_003516410.1| chr0 104314168 104317548 +
6 domain predictions
3 GO terms
Lj0g3v0224079.1
n.a. PREDICTED: probable WRKY transcription factor 49-like [Glycine max] gi|356523163|ref|XP_003530211.1| chr0 115661731 115663762 +
6 domain predictions
3 GO terms
Lj0g3v0238279.1
n.a. PREDICTED: probable WRKY transcription factor 33-like [Cicer arietinum] gi|502104373|ref|XP_004492519.1| chr0 123569555 123571936 +
6 domain predictions
3 GO terms
Lj0g3v0240279.1
n.a. PREDICTED: WRKY transcription factor 6 [Glycine max] gi|356547095|ref|XP_003541953.1| chr0 124645939 124649093 -
6 domain predictions
3 GO terms
Lj0g3v0242439.1
n.a. WRKY transcription factor [Medicago truncatula] gi|357437105|ref|XP_003588828.1| chr0 125710259 125711309 +
6 domain predictions
3 GO terms
Lj0g3v0244439.1
n.a. transcription factor WRKY [Lotus japonicus] gi|193237581|dbj|BAG50067.1| chr0 126834296 126836485 +
6 domain predictions
3 GO terms
Lj0g3v0248869.1
n.a. PREDICTED: probable WRKY transcription factor 2-like [Glycine max] gi|356530021|ref|XP_003533583.1| chr0 128969600 128974074 +
6 domain predictions
3 GO terms
Lj0g3v0254589.1
n.a. WRKY32 protein [Glycine max] gi|351723051|ref|NP_001237777.1| chr0 132185237 132190713 +
6 domain predictions
3 GO terms
Lj0g3v0256519.1
n.a. PREDICTED: probable WRKY transcription factor 42-like isoform X1 [Cicer arietinum] gi|502086327|ref|XP_004488182.1| chr0 133154884 133158918 -
6 domain predictions
3 GO terms
Lj0g3v0272799.1
n.a. PREDICTED: probable WRKY transcription factor 2 [Glycine max] gi|356515390|ref|XP_003526383.1| chr0 141367271 141370332 -
6 domain predictions
3 GO terms
Lj0g3v0272799.3
n.a. PREDICTED: probable WRKY transcription factor 2-like [Cicer arietinum] gi|502127371|ref|XP_004499679.1| chr0 141367271 141368221 -
6 domain predictions
3 GO terms
Lj0g3v0274859.1
n.a. PREDICTED: probable WRKY transcription factor 32 [Glycine max] gi|356543305|ref|XP_003540102.1| chr0 142525490 142528471 +
6 domain predictions
3 GO terms
Lj0g3v0274869.1
n.a. WRKY24 [Glycine max] gi|151934177|gb|ABS18426.1| chr0 142528466 142529416 +
6 domain predictions
3 GO terms
Lj0g3v0284269.1
n.a. PREDICTED: WRKY transcription factor 22-like [Cicer arietinum] gi|502156909|ref|XP_004510691.1| chr0 147475762 147477008 -
6 domain predictions
3 GO terms
Lj0g3v0288169.1
n.a. PREDICTED: probable WRKY transcription factor 33 [Glycine max] gi|356553124|ref|XP_003544908.1| chr0 149747747 149751315 -
6 domain predictions
3 GO terms
Lj0g3v0298769.1
n.a. PREDICTED: probable WRKY transcription factor 41-like [Glycine max] gi|356509299|ref|XP_003523388.1| chr0 155255674 155257904 +
6 domain predictions
3 GO terms
Lj0g3v0340829.1
n.a. PREDICTED: probable WRKY transcription factor 21-like [Glycine max] gi|356536719|ref|XP_003536883.1| chr0 178510395 178513609 +
6 domain predictions
3 GO terms
Lj0g3v0357379.1
n.a. PREDICTED: probable WRKY transcription factor 48-like [Glycine max] gi|356558117|ref|XP_003547354.1| chr0 188167096 188170678 -
6 domain predictions
3 GO terms
Lj1g3v0465620.1
n.a. PREDICTED: probable WRKY transcription factor 72-like [Glycine max] gi|356519041|ref|XP_003528183.1| chr1 6195012 6198921 +
6 domain predictions
3 GO terms
Lj1g3v1134110.1
n.a. PREDICTED: probable WRKY transcription factor 70-like [Glycine max] gi|356516231|ref|XP_003526799.1| chr1 14071570 14075089 +
6 domain predictions
3 GO terms
Lj1g3v1220240.1
n.a. PREDICTED: probable WRKY transcription factor 51 [Glycine max] gi|356516303|ref|XP_003526835.1| chr1 14867061 14869111 -
6 domain predictions
3 GO terms
Lj1g3v1787630.1
n.a. PREDICTED: probable WRKY transcription factor 50-like [Glycine max] gi|356507032|ref|XP_003522275.1| chr1 21218874 21220198 -
5 domain predictions
3 GO terms
Lj1g3v1815540.1
n.a. PREDICTED: LOW QUALITY PROTEIN: probable WRKY transcription factor 40-like [Glycine max] gi|356507254|ref|XP_003522384.1| chr1 22066549 22068895 -
6 domain predictions
3 GO terms
Lj1g3v1969400.1
n.a. WRKY50 [Glycine max] gi|151934217|gb|ABS18446.1| chr1 23354936 23356585 -
6 domain predictions
3 GO terms
Lj1g3v2416620.1
n.a. WRKY transcription factor [Medicago truncatula] gi|357506347|ref|XP_003623462.1| chr1 28362561 28365781 -
6 domain predictions
3 GO terms
Lj1g3v2776620.1
n.a. PREDICTED: WRKY transcription factor 22-like [Glycine max] gi|356531951|ref|XP_003534539.1| chr1 31718574 31738984 +
6 domain predictions
3 GO terms
Lj1g3v2776620.3
n.a. PREDICTED: WRKY transcription factor 22-like [Glycine max] gi|356531951|ref|XP_003534539.1| chr1 31718574 31720110 +
6 domain predictions
3 GO terms
Lj1g3v2806670.1
n.a. WRKY transcription factor [Medicago truncatula] gi|357507579|ref|XP_003624078.1| chr1 31773003 31775425 +
6 domain predictions
3 GO terms
Lj1g3v2823880.1
n.a. PREDICTED: probable WRKY transcription factor 2-like [Glycine max] gi|356530021|ref|XP_003533583.1| chr1 32156576 32160334 -
6 domain predictions
3 GO terms
Lj1g3v2953600.1
n.a. PREDICTED: probable WRKY transcription factor 72-like [Cicer arietinum] gi|502090221|ref|XP_004489160.1| chr1 33570819 33577804 +
6 domain predictions
3 GO terms
Lj1g3v2953600.2
n.a. PREDICTED: probable WRKY transcription factor 72-like [Cicer arietinum] gi|502090221|ref|XP_004489160.1| chr1 33570819 33572971 +
6 domain predictions
3 GO terms
Lj1g3v2982410.1
n.a. PREDICTED: probable WRKY transcription factor 3-like [Glycine max] gi|356567076|ref|XP_003551749.1| chr1 34003980 34009392 -
6 domain predictions
3 GO terms
Lj1g3v3443950.1
n.a. PREDICTED: probable WRKY transcription factor 49-like [Glycine max] gi|356523163|ref|XP_003530211.1| chr1 39866156 39868187 -
6 domain predictions
3 GO terms
Lj1g3v3847230.1
n.a. PREDICTED: probable WRKY transcription factor 56-like [Glycine max] gi|356561712|ref|XP_003549123.1| chr1 44181039 44184626 -
6 domain predictions
3 GO terms
Lj1g3v4578830.1
n.a. n.a. chr1 54326813 54332829 +
6 domain predictions
3 GO terms
Lj1g3v4578840.1
n.a. PREDICTED: WRKY transcription factor 44-like [Glycine max] gi|356572389|ref|XP_003554351.1| chr1 54328945 54336675 -
6 domain predictions
3 GO terms
Lj1g3v4830200.1
n.a. PREDICTED: probable WRKY transcription factor 42-like [Glycine max] gi|356505687|ref|XP_003521621.1| chr1 58307191 58310072 +
6 domain predictions
3 GO terms
Lj1g3v4830200.2
n.a. PREDICTED: probable WRKY transcription factor 42-like [Glycine max] gi|356505687|ref|XP_003521621.1| chr1 58307191 58310072 +
6 domain predictions
3 GO terms
Lj1g3v4849490.1
n.a. WRKY transcription factor [Medicago truncatula] gi|357511377|ref|XP_003625977.1| chr1 58724613 58728202 -
6 domain predictions
3 GO terms
Lj2g3v1277260.1
n.a. PREDICTED: probable WRKY transcription factor 4 [Glycine max] gi|356497940|ref|XP_003517814.1| chr2 20194722 20204619 +
6 domain predictions
3 GO terms