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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR003691
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 6 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.713s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v0775770.1
n.a. CrcB-like protein [Medicago truncatula] gi|357461601|ref|XP_003601082.1| chr1 10165189 10168471 +
2 domain predictions
1 GO term
Lj1g3v0775770.2
n.a. PREDICTED: UPF0695 membrane protein C977.11/PB8B6.06c-like [Cicer arietinum] gi|502130257|ref|XP_004500587.1| chr1 10165189 10168471 +
2 domain predictions
1 GO term
Lj3g3v0807580.1
n.a. CrcB-like protein [Medicago truncatula] gi|357455675|ref|XP_003598118.1| chr3 9695534 9700090 +
2 domain predictions
1 GO term
Lj5g3v1865690.1
n.a. CrcB-like protein [Medicago truncatula] gi|357461601|ref|XP_003601082.1| chr5 26617811 26620787 +
2 domain predictions
1 GO term
LotjaGi1g1v0256100.1
n.a. Camphor resistance CrcB-like protein; TAIR: AT2G41705.1 camphor resistance CrcB family protein; Swiss-Prot: sp|P0CU19|FEX1_SCHPO Fluoride export protein 1; TrEMBL-Plants: tr|V7AXN7|V7AXN7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0256100 LjG1.1_chr1 62003944 62010348 +
3 domain predictions
1 GO term
LotjaGi3g1v0100500.3
n.a. Camphor resistance CrcB-like protein; TAIR: AT2G41705.1 camphor resistance CrcB family protein; Swiss-Prot: sp|P0CU19|FEX1_SCHPO Fluoride export protein 1; TrEMBL-Plants: tr|G7IV96|G7IV96_MEDTR Camphor resistance CrcB-like protein; Found in the gene: LotjaGi3g1v0100500 LjG1.1_chr3 12483285 12491901 -
3 domain predictions
1 GO term