Domain Predictions — View

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PF02537

Source: Pfam

Description

CrcB-like protein, Camphor Resistance (CrcB)

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0016021 View details of GO:0016021 AmiGO InterPro QuickGO	Cellular component	Integral component of membrane	The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.	Subterm of GO:0031224

Associated Lotus transcripts 6

Transcript	Name	Description	Predicted domains	Domain count
Lj1g3v0775770.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	CrcB-like protein [Medicago truncatula] gi\|357461601\|ref\|XP_003601082.1\|	Domains CYTOPLASMIC_DOMAIN IPR003691 NON_CYTOPLASMIC_DOMAIN PF02537 PTHR28259 PTHR28259:SF1 TMhelix TRANSMEMBRANE mobidb-lite	9
Lj1g3v0775770.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: UPF0695 membrane protein C977.11/PB8B6.06c-like [Cicer arietinum] gi\|502130257\|ref\|XP_004500587.1\|	Domains CYTOPLASMIC_DOMAIN IPR003691 NON_CYTOPLASMIC_DOMAIN PF02537 PTHR28259 PTHR28259:SF1 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION TMhelix TRANSMEMBRANE	12
Lj3g3v0807580.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	CrcB-like protein [Medicago truncatula] gi\|357455675\|ref\|XP_003598118.1\|	Domains CYTOPLASMIC_DOMAIN IPR003691 NON_CYTOPLASMIC_DOMAIN PF02537 PTHR28259 PTHR28259:SF1 TMhelix TRANSMEMBRANE mobidb-lite	9
Lj5g3v1865690.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	CrcB-like protein [Medicago truncatula] gi\|357461601\|ref\|XP_003601082.1\|	Domains CYTOPLASMIC_DOMAIN IPR003691 NON_CYTOPLASMIC_DOMAIN PF02537 PTHR28259 PTHR28259:SF1 TMhelix TRANSMEMBRANE mobidb-lite	9
LotjaGi1g1v0256100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Camphor resistance CrcB-like protein; TAIR: AT2G41705.1 camphor resistance CrcB family protein; Swiss-Prot: sp\|P0CU19\|FEX1_SCHPO Fluoride export protein 1; TrEMBL-Plants: tr\|V7AXN7\|V7AXN7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0256100	Domains CYTOPLASMIC_DOMAIN IPR003691 NON_CYTOPLASMIC_DOMAIN PF02537 PTHR28259 PTHR28259:SF1 TMhelix TRANSMEMBRANE mobidb-lite	9
LotjaGi3g1v0100500.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Camphor resistance CrcB-like protein; TAIR: AT2G41705.1 camphor resistance CrcB family protein; Swiss-Prot: sp\|P0CU19\|FEX1_SCHPO Fluoride export protein 1; TrEMBL-Plants: tr\|G7IV96\|G7IV96_MEDTR Camphor resistance CrcB-like protein; Found in the gene: LotjaGi3g1v0100500	Domains CYTOPLASMIC_DOMAIN IPR003691 NON_CYTOPLASMIC_DOMAIN PF02537 PTHR28259 PTHR28259:SF1 TMhelix TRANSMEMBRANE mobidb-lite	9

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	16.67