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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR003736
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

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Download the entire search result as a CSV file.

We have found 10 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.649s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0066299.1
n.a. Esterase ydiI [Medicago truncatula] gi|357450257|ref|XP_003595405.1| chr0 23280146 23281536 -
2 domain predictions
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Lj0g3v0066299.2
n.a. Thioesterase superfamily protein [Theobroma cacao] gi|508715055|gb|EOY06952.1| chr0 23280146 23281932 -
2 domain predictions
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Lj0g3v0131499.1
n.a. PREDICTED: acyl-coenzyme A thioesterase 13 [Vitis vinifera] gi|225453708|ref|XP_002271066.1| chr0 59823003 59825887 +
2 domain predictions
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Lj1g3v1386400.1
n.a. PREDICTED: acyl-coenzyme A thioesterase 13-like [Glycine max] gi|356508896|ref|XP_003523189.1| chr1 16899926 16902091 -
2 domain predictions
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Lj1g3v2609210.1
n.a. PREDICTED: acyl-coenzyme A thioesterase 13 [Vitis vinifera] gi|225453708|ref|XP_002271066.1| chr1 30112922 30115878 +
2 domain predictions
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LotjaGi1g1v0330100.1
n.a. Acyl-CoA thioesterase, putative; TAIR: AT1G04290.1 Thioesterase superfamily protein; Swiss-Prot: sp|Q9NPJ3|ACO13_HUMAN Acyl-coenzyme A thioesterase 13; TrEMBL-Plants: tr|I3SFW7|I3SFW7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0330100 LjG1.1_chr1 78588405 78595940 -
2 domain predictions
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LotjaGi1g1v0330100.2
n.a. Acyl-CoA thioesterase, putative; TAIR: AT1G04290.1 Thioesterase superfamily protein; Swiss-Prot: sp|Q9NPJ3|ACO13_HUMAN Acyl-coenzyme A thioesterase 13; TrEMBL-Plants: tr|I3SFW7|I3SFW7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0330100 LjG1.1_chr1 78594163 78595693 -
2 domain predictions
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LotjaGi1g1v0467300.1
n.a. Acyl-CoA thioesterase; TAIR: AT3G61200.1 Thioesterase superfamily protein; Swiss-Prot: sp|P34419|YLZ6_CAEEL Putative esterase F42H10.6; TrEMBL-Plants: tr|A0A151TBD2|A0A151TBD2_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0467300 LjG1.1_chr1 97716260 97719689 +
2 domain predictions
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LotjaGi3g1v0377800.1
n.a. Acyl-CoA thioesterase; TAIR: AT3G61200.1 Thioesterase superfamily protein; Swiss-Prot: sp|P34419|YLZ6_CAEEL Putative esterase F42H10.6; TrEMBL-Plants: tr|I3S8B6|I3S8B6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0377800 LjG1.1_chr3 77052613 77059846 -
2 domain predictions
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LotjaGi6g1v0218200.1
n.a. Thioesterase family protein; TAIR: AT1G48320.1 Thioesterase superfamily protein; Swiss-Prot: sp|Q9SX65|DNAT1_ARATH 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1; TrEMBL-Plants: tr|I3SG93|I3SG93_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0218200 LjG1.1_chr6 52047675 52052993 -
2 domain predictions
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