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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0218200 |
| Transcript ID | LotjaGi6g1v0218200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Thioesterase family protein; TAIR: AT1G48320.1 Thioesterase superfamily protein; Swiss-Prot: sp|Q9SX65|DNAT1_ARATH 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1; TrEMBL-Plants: tr|I3SG93|I3SG93_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0218200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:52047675..52052993) extracted from Lotus japonicus Gifu genome v1.2.
GAAAAATAGTACTCACCAACCAATCTTTCATCTATTTTCTCCTGAATTGCCAAAAATACCCTCTGAATCAACAACATCCA ATGATTCTGCAATCCATCTTTTCATAACTCTTTTCTTTTTCAGCTCACAAAGAAAGAGAGAGAGAGAGAGAGAGCCTCTG ATCCAACTTTTCTCCATGGAAGACAAGCCATCATCATCATCATTGGCAACATCAAAGACTGCAGCTTTGGATACCCCTCT TCATGCAATTGGATTTGAGATTGAAGAATTATCACCACAGAGAGTTACTGGTCGTCTCCCTATTACCCTCAAGTGCTGCC AGGTCCACCCCACTTTGTAATTTTGTCTCTTATTACCAAAGTTTCATGCTTTTTTGAATATTCTTGGGAGATAAAAATGA AGAATATTGATTGGAATTGTTGGTGATTTGATTATTGTGGTGTCTGTGTGTATTTATTTGGCAGCCATTTAAGGTTCTTC ATGGAGGGGTATCAGCAATGATAGCAGAGTCTCTTGCAAGCATGGGAGCCCACATGGCTTCTGGTTATCAAAGAGTGGCT GGAATTCAACTCAGCATCAACCATTTGAAACGAGCAGAGCTTGGTGACTTGGTCCATGCTGAAGCTACCCCTTTAAATGT TGGCAAAACCGTTCAGGTTTGTGTTTCTCCTCGTATATACTATGTTTTTGTTTTTTTACAATTTTCTGGAATTCCATTTA GATATAATGAACCATCATATGCGATATAAGAAATAACAGAGTATGATATCTATGCGATTAGAATTTAGAAGCACATGTTT ATTTGTGTCCAATGATGTAGATTTGAGATGATGATGATGATGATAACAATGTGATCAAGGGAACAAGGAACAACAATTAT AATCTTCTAACAACTTAGAAGAATGGAATTCAGGATTTTGATCTGGCATAGGTTGGGGGTGAGAAATGTATGATTGAATG AGTTTTGATAATGGATAGATAGATCAAAAGGAAAATCATCAATGTATTTAGTATCTATTAAAAAGCCTTTAAAACAAAAT TAATTCATCCATTAATCTATTTTAATGAATGGAATTAAAGTCAATTCTCTGCCTCCTACCCTCTATCAATTCTCTGCCTA CCTCTTCCACATCCACTCTTATTATCCGAACAACTATGGGAGAATTAAGACTTAAAAGTTGAATTTTTAACTTATTTTAG GCAGGACTAACATGATTCATTCCTCCCACCCACCACTCTCTTTCTCCTTTTAATCCTTGAGGGTATGGTTGATTTCTTCT TTATCCTTAAAGGGAATGGTGGTTGAGATCTTACTGAATGAAGAGGTTGCTATCATTTACCTTCAAGTGTCATCGTTAGC AATGATGGAAAGACCTACATATGGCTTGTTTTGTATGTTGTGCTAAATATGATTTAATAAGCTTATATAATATTACTATT TAAGATGATCTAATTTCATGGGATAAGTTCTAGAACTCTGGCGTGGGCAATCAACAACCCACTACCCCTGGGGGAAAAAA ACTCAGCGGATTAGGGACAGCAAGATCCTGTGGTGGATAAACATTTGTTGCTAAAATTCCCAACAGTCATTTACTGAAAA ACAATAGTACTCTGTTTATCATATACAAACTATGCTAATGCCTGAGGTTTCCTGATTAGAAGAAGAAAAAAACATAACAG TTTTCTTTGTGGCAGGTGTGGGAGGTAACAATCTGGAAGATTGATCCTTCAAACTTACAGAACAGATCGTTGGTATCATC ATCTAGGGTAACTCTAATATGCAACATGCCTGTCCCAGATCATGCAAAAGAGGCTGGTCAATTGCTGAAGAAGTATGCAA AACTGTAACATGTTGTTTGATTTTAAATGAAGTTCAAAATAGCTTGGATTGAATCACAATAAACCAAAAATTCAGATATG TTTAAATCAAGATTCTATCATTTCAGTATGTACACCATGGTAGACCTTGTAGCTTAGACGGAAGTGTAGTAGTATTAATA TCTTACAGCTGAAAATGGTTCAAATTACACATGGTAGATGAACCCAAAAACCCAAATGAGCCAACACAGAATCCATGCCA GTAATTTACTGAACCTCAGGATCAGAATAGAACCCTCATTGAGCAGCTTTTCTCATCATCTTCCAAAGGCAGCTTCAAAC TTTAAATAAAGCACCAACGGTTCCTCGTGATCATACTTCAATACACAGCTTGTAATTTCAACGGAAACCATGTGAATGAA AATGCCTTATAACAACTCAGCGATTCCCATTCAACCAAGCAAGCCTAATTCCTGAAACAAAAGGCTATACACACCTAAGC AATGTACGTAGTGTCACGAAGCTGGGTTCTTCTTGCGAAATGATCTCGATCTAGTACTGCTTGCATCCTTCTTTCCCATT GTCACACCAGAAATGTTATGCCTAAAAAAGGATTCACACATCATGATCATTTTCATACACTAAGAAGAAGAGCTAAATCC AGCAACAACCATACAAAAAACAAGGAAAACATGGAACAATGTTCCACACCTGAGATCGCTAAGTTGTTTCGTCAAATCGT TCAGCTCCCTACTCGAAAGCTTGAGAGAATATAAAGTTCCAGGCACCTCTTCTGAAACAACCTTAGACAATTTCTTCACT GAAGTTCTCAATCTTCCGAAAGCCTAAAAAGAACACCAACTATTTGAACATTAGCCATTCAAAACATCACTGACATTTGC AAATTGCAATACACACATTTGTGTGGATAAACCTACAATTAAGGTTGGAATGGAAACCGCAGCCACTGATAAAAATGCAC AAAAAGCCTGCAAATCCAGAAAAACACAAACTTAAGGTTCAATTTATCTTAAAATAAAATCAACTTCGACCCAGAATCCA AAAATGGCTGAAGATGGAAACTTTTATGGTTAATTGATGAGGGAATGAGGGATGATTATCATGTGTACAGTACCATGGAG AGGACGAACAAGTGAGAGAGAAGCCCCAATTCAGGGGTGGGTCGAAACCCTAGATTTGTTGACGGTGGAGCTGCTGCGAT ACGTGACTGCGTAGATGGTGAATTGGGTGTCTGTTGTTCGGAGATTAACGGCGGCGGTGGCGTGGTTGAGGTTCTGACAC GGAGGGAGAATGGAGAGGGTGAATTGGGGAGAGATGGAGGGGTTATCAGGGGAATTGGGAATTTGAGGGATTTGAAAGGG TGCAGAGATGGAGATTGCATTTGAGACAACATTGATGGATTGGGGAAATTGGTGGGAGGTTTGGATTTTGCATCAAATGA TAGGTCCTTATTATTAGGGACAAAACTCATGTAGAATTCTGCATATGTGATTTTCAAATAGAAGAATCATGTTTTGAGGC TAATGCATCATGTTGGATAAGAGGATTACATCAAAGAGGAACCTCATCAATCCAAACCAAATTTTAAAATGGAAAGACCT TCTTAGCCGGTCGATCCGTGACGGATAAAGAAAAGGTTAATAAAATCAAAATTACAAGCAACTAATTGACAATTTTGCAC TAAAGAGAGAATATACGAATTATAGGACCTAGCCTCCTTCCAAAGCTTGAAAAGTTGCAGATAGTTTATTTCAAAGCAAA CTGAACGAAAGCATTAGTGCATATATCGCTAAAGAAAGAGCCCACCAAAAGTAAAGAGTCTTTGAGAAAGCTCGAGGGAT TTGAAGTTCAAGGGAATGAAGATCATGTTTGCTTATTGAAAAAATCTTCATATGACCTAAAATAGACTCCAAATAGTGGT ACAAGAGGTTTGACACCTTCATGCTTGAAAATGGCTATTGTAGAGGTGAGCATGATAGTTGTGTCTATTACAAGAAGTTT ATAGATAAGTCATTCATCTATTTACTCTTGTATGTTGATCATATGTAAGAACATGTCTGAAATAAAAAAACTTGAAGCTC AATTGAGCTTGTAGCTGGAAATTAAAGACTTAGGAGCTGCAAAGAAAATATTTGGAATGGAGATTCATAGAGACAGAAAA CCAGAAATGCTATTTTTGTCACAAAAGAAGTACGTTGGAATGTTTTGGCATGCAAAATATGCTAAACCTGTCACTACTCT ATTGGCGACCCCACTTCAAACATTCAGCTGCCTTAGAACGAAAAGAAGGAGATGTCAGATGTACCTTATGCTAGTGCAGT TGACAGTTTCATGTATGCCATAAATATACACTTGACCAGATATTGCAAAAGCAATAAGTATGATAAGCCGGTATATGGCA AGTTCTGATAAAGTTCAGTGGAAAACTGTGAAGTGGATTTTGTGCTACCTTAAAGATACCATAGATATAGACTTATTGTA TGGAAAATTCAAAGATGTCGAGAGCAATATTTCCGGATGTGTTGACTCAGATTATGTTGGAGATCTAAATAAATGAAGAT CACTCACTAGGTATGTCACACTATCCAGTTGTACTATTAGTTGGAAAGCAATGCTACAAGCAGTTGTTGAACATCTCATC TCTTTATTCCAAACTCTCTTCCGCGTTGGAATAATGCCTTTAAGAACCTGCCACATAAATGATGGTGCCTAACGATGACA TTATATTCAATGTCTAAAGCTTAGCCTAACCCCTTAAGGACATCTTGCCCCGTTCAGGTCGGCCTAGTTATGAATAGCAA TAGGCTAGGTCAGGCCAGGTCTTTAGTGGCCCAAGCCTGACTCACATTCTAATTTTGCAGTCTAAGTCTAACATGTGTCT TGTCATATGTCAAATTTTGAATTACATTTTCATGGATCATTGAAATTTTACTATTTTTAACAAATCTTTGAGAAAAAATT TATGACCACTAGCACAAATATTTGATCCTCATTCCTCCATGAGAATCTTAAACCATGAAGTCATGATCGATCGAGCTTGC ATAGTTTAATTAGTGGAGACTCCAAAAATTAGGGGTTGATGATTTTTAGAGCAGGAAAAAAATTGAACCATCCAGAGGAG GAGGAAATTAAGAAGTGTTCTTAATTCTTTATAGCCGCCGGAGATGGGAATGGGATAAGCACGTAGGCACGTGGTGTACG GAAGAAGGAAAATGGAAGAAACGATATATGTAGATGAGGACGATGACTGTTTTCTTACTTCTGATGAGATAAGATAAGAG CAGCTGATTTGGATTATCAGATCATCCTCCAAGGTAAAGTGACGTAGCATTATCAAAACTATGATATGAGGAATGAATAT GGGAATTTGAAAAGTAAAAGTTGTATAGTACTTACATGAACTAATGCGTTTGTTTGTGTTCTCTACAAATTCATTTGAAA CTATTATGAGAATCTTATTCATATTTTCACCCATGTAAA
CDS sequence (LotjaGi6g1v0218200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGACAAGCCATCATCATCATCATTGGCAACATCAAAGACTGCAGCTTTGGATACCCCTCTTCATGCAATTGGATT TGAGATTGAAGAATTATCACCACAGAGAGTTACTGGTCGTCTCCCTATTACCCTCAAGTGCTGCCAGCCATTTAAGGTTC TTCATGGAGGGGTATCAGCAATGATAGCAGAGTCTCTTGCAAGCATGGGAGCCCACATGGCTTCTGGTTATCAAAGAGTG GCTGGAATTCAACTCAGCATCAACCATTTGAAACGAGCAGAGCTTGGTGACTTGGTCCATGCTGAAGCTACCCCTTTAAA TGTTGGCAAAACCGTTCAGGTGTGGGAGGTAACAATCTGGAAGATTGATCCTTCAAACTTACAGAACAGATCGTTGGTAT CATCATCTAGGGTAACTCTAATATGCAACATGCCTGTCCCAGATCATGCAAAAGAGGCTGGTCAATTGCTGAAGAAGTAT GCAAAACTGTAA
Protein sequence (LotjaGi6g1v0218200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEDKPSSSSLATSKTAALDTPLHAIGFEIEELSPQRVTGRLPITLKCCQPFKVLHGGVSAMIAESLASMGAHMASGYQRV AGIQLSINHLKRAELGDLVHAEATPLNVGKTVQVWEVTIWKIDPSNLQNRSLVSSSRVTLICNMPVPDHAKEAGQLLKKY AKL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 5 | 163 | 159 | 2.2E-81 | – | |
| PANTHER | 5 | 163 | 159 | 2.2E-81 | – | |
| Gene3D | 6 | 143 | 138 | 4.9E-41 | – | |
| SUPERFAMILY | 18 | 140 | 123 | 2.3E-24 | ||
| TIGRFAM | 23 | 120 | 98 | 8.8E-20 | ||
| CDD | 24 | 141 | 118 | 3.09006E-27 | – | |
| Pfam | 52 | 123 | 72 | 9.8E-15 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0218200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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