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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0467300 |
| Transcript ID | LotjaGi1g1v0467300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Acyl-CoA thioesterase; TAIR: AT3G61200.1 Thioesterase superfamily protein; Swiss-Prot: sp|P34419|YLZ6_CAEEL Putative esterase F42H10.6; TrEMBL-Plants: tr|A0A151TBD2|A0A151TBD2_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0467300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:97716260..97719689) extracted from Lotus japonicus Gifu genome v1.2.
GAACAAACGACAGTCAATGTCAGCATTAGAGGGGTATGTTTTTGGTCCCTGAAATATACCTTATTTCTGATTTTAGTCGC AAATTTTATATTATATTTTTATAATAAGAGTTAGAGGACATGTGAATTAGGTGAGAGAGATCCAGGGTTAGGGGGTGCAA TTTATCTTTCCGATATACCAAAAAGGATATTCGGAAAATTATTCGGGAACCTCCTTCACCCAACTCATATGTCCTAGGAA TTATTTGGGGACCAGTATCTAAGATATATAAGGAAATTGACCAATGACATTTCGGCCAGAGACACCAACGGCGGAAGCTT CCACTGTTGGTCAAACTCCACCACCGTCTTCCTCCTCAATCTCCGACCAAATGGACCCTCAACATGCTTCCAACACCCTC GTTCACCTTAGAAAACTGGGCATGGCCCAACCTGTTCCTGAGAGCTGTAACACCAGTGGCTTCTATTCCCACTTCTATGA AAGTTTCATCAAGGTCGATCACATCCAGCGGGGGAGAATCTCTTGCACTGTTCCTGTCAAACCCGCAATCTCTGTAGCAC CCCTTTTTCCCTCTTGATTTGTTTTCTCTCTCTCTTTATGTTCCAGAAAATTGGGTTGTGCTTATGTTTTGACTTGTATT GTTATGTGGGTCAATCCTAGTTCCTCATAAATTGCTGTAGAATTGTTAAAAATTTGAGCTTTTTTATTATATTATTGCTC TTGGTTCTCTGTTTGGCAGCTGAGAAAATTGGGAAGAAGGGTAGTACTTGTGTTTTACAATGTCTGATAATTTGCATAAT AGCTATTTGAAGATGGCCATGTTTGTTTTTTATTTGTATCATCTTCGGATCAGCTTCTCTTTCTATAATTAATTTTGAAA CCTAGAAGCTAGATATAGAAGCTTGTCCCCATAATTGAGTCTGACTTTAGATAATTGCTGAGGAATTCGCAAACTTATCA TATGTTACTCTGGAATGTGGATATTTTCTTCGTTGCTTAGAAATTTGGGTAGAGGATTGATTGAATCAGCTGAAGATACT GAGGAATTTGTGATTTGTTGTTGGTCATCTTCATTGTTAGTAATGTTGAGTATGATCAATTTTAGGAGTATAGAAATTTT TCGTTGATTCATATTTGTTATGCTTGGTCATCCAACTTGTTTTCCGGGTTGCGTTAGTGGACTGGACTCCAAGCTCCAGG TGAACAGAGTGAAAAAGCGACTCTGACAGTGAAGTCAGTTTGAGATCGAGCAGTGTGCATAGTAAATATTGGATAATGAA TGTGTATCTTGAATGTGCTGGGTGCCCCTTATATGTAAATGGTGGAAACATTTGCTCTTCGATGTATTAGGGGAATAGTT TTAGGGGATCAGGGTTTGTGATTACTCACCTGATCCTTGATCAATTTTGTTGAGACAGATACATCTCGGATCAAGTATTC GGCCCAAGATTTGGCCTGAGTGGGGAGTGTTTAAGTGGGCCGACCAATATGTGCCCTAGATTGGGTCCATAAAAATATTT ATGCAGTCAATTGAATGGCTTCAATTTTGGTCAAAAATTCTCACATTACTGCATGTTAGAAATTATTGGTGGGGAGAGGG TGGATATTTTTAATTTCTCCTATGGACTTGCAGAATGATTATGGAACATTACATGGGGGTGCTGTTGGGTCTCTGGTTGA GCTGCTATCTATTGGTTGTGCTAGAACTGTTGTTGCTGAGGACAGAGAACTTTTCCTTGGGGAAATTAACATATCTTACC TCTCTGGAGTTCCAACCAATGTGAGTTCTGTTTTTGTATAGTGAACTTTGATTCTCTTTATTGTCATGTTTACATTACTG CTTTGCCCTTTCTGCAAATCAATATGTAAAAAATAAGTTTGTTTGGATTTTCAAGCCTTCGGAATGCCTTATCATCTTGT TTGAGGAAATTCAATACTCTAGCCTGAGTTACAGGTGAAAGTGAGCTTAGGAATACAAAAATTTATCACACTTCAACATT AAGTATTAGACATATAATATAAAATCATTCATGTCCCTTCTACCCAACAGCTTAAGGTTTTGGGTGGGCTTGTGCATGGT TCTCCCTTCAAGCCCAATGGGCTCTTGCGTGCAGGGGCGTGTTAGATATATCATATAAGCTAATTTATGTGTCATCTACT CAACAGTTTAAGCTTTAGTCGGGATTCTTAGCATTGTGAAAGTTTTGCATTGTTCCAACTGCATTTGCATAATTGCTTAG CATGTACATAGAGAATAGTTTTTCAGTGTGATTTGGACCTTACTTATTAGGGTTAATGCTGCAGAGAATTTAAATTAAAG GATGAAATTTAGTAGATAAAGTTACCATCTCATTCAATTTTTTATGTTTGTGAGTTGCATTTTTTCACATGATGCTTACA TCCATCCCATATACATGTTCCTCCTCATTGTCTACCTCTTCAATAAATGGATTGTTGATGTTCCATTGTTTGTGTAGGAG GAAGTTCTAGCTGATGCCTCCGTAGTGAAGAGTGGAAGAAATGTGACTATGGTTGCACTAGAGTTTAAAGAAAAGAAATC TGGGAAATTGGTTTATATTGCTCATGCTACCTTCTATAACTTACCCATTGCCAAGTTATGAACAATTATCTTTCAGGTCA TTATGCTGATTCATATCAGTTTTATATCCAGAGTGCTCTACATGTGTTATATTTTTGTTTTTTTGTCCATTGCCATATCT TTTATATCTCGGAAAAGCTAGAAACAATCTGCAGTTTCTTATTGATCTAGTGAAGCTGAATATAGATCTCTCACCCTTGT GAAGCTCTCTGGTTAACATATGCGCTTGCTGATCTCCGTATTGCATCCCTCCTATTAGTGGTCATTTACTGTGATAATCG TTCAGCCCTACATCTAGCTGCCAATTCCGTATTTCACAAACGTACTGAAAACATTGAAATAGATTGTCACATAGTATGAG TTAAGGTTCTATTTGGTATTTTACATCTTCTTCATGTCCCTTCATCTGATCAGGTGGCCGATGTTTTCACCAAAACCATT TCACAGTTCACAGGGGCCATTTCAATTCCTGGTTGCCAATCTTGGATAGCTTGATCTCCATTCCTGTTTGGGATTACAGA TATTAGTTTAGTCAGTTATTTTGTTATTTTACTTCTTTCTGTTAGTCCGTTTCTTCTAAATTGTAACTGACTTAGATTGC TAGCAATGTATATTAAGCTAGTCTCTGTATTGTATCAGTGTAAGAATGACAATTCTTCCATTCACGCATCTTTCTACTGT ACTTGTTCTTCTTTTCTCTCTAAGTGTCAACATTTATCAAATCTGAAAAATTGTTCCGTCAATAAGAAACATGATTGAAT AATTTTGTTACAGTAAAAAGTCGTACACAATAAAAAATGATGACTATTTACACCATTTAATTAGTTTTAT
CDS sequence (LotjaGi1g1v0467300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACATTTCGGCCAGAGACACCAACGGCGGAAGCTTCCACTGTTGGTCAAACTCCACCACCGTCTTCCTCCTCAATCTC CGACCAAATGGACCCTCAACATGCTTCCAACACCCTCGTTCACCTTAGAAAACTGGGCATGGCCCAACCTGTTCCTGAGA GCTGTAACACCAGTGGCTTCTATTCCCACTTCTATGAAAGTTTCATCAAGGTCGATCACATCCAGCGGGGGAGAATCTCT TGCACTGTTCCTGTCAAACCCGCAATCTCTAATGATTATGGAACATTACATGGGGGTGCTGTTGGGTCTCTGGTTGAGCT GCTATCTATTGGTTGTGCTAGAACTGTTGTTGCTGAGGACAGAGAACTTTTCCTTGGGGAAATTAACATATCTTACCTCT CTGGAGTTCCAACCAATGAGGAAGTTCTAGCTGATGCCTCCGTAGTGAAGAGTGGAAGAAATGTGACTATGGTTGCACTA GAGTTTAAAGAAAAGAAATCTGGGAAATTGGTTTATATTGCTCATGCTACCTTCTATAACTTACCCATTGCCAAGTTATG A
Protein sequence (LotjaGi1g1v0467300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTFRPETPTAEASTVGQTPPPSSSSISDQMDPQHASNTLVHLRKLGMAQPVPESCNTSGFYSHFYESFIKVDHIQRGRIS CTVPVKPAISNDYGTLHGGAVGSLVELLSIGCARTVVAEDRELFLGEINISYLSGVPTNEEVLADASVVKSGRNVTMVAL EFKEKKSGKLVYIAHATFYNLPIAKL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 33 | 33 | - | – | |
| PANTHER | 22 | 186 | 165 | 3.2E-63 | – | |
| PANTHER | 22 | 186 | 165 | 3.2E-63 | ||
| Gene3D | 46 | 180 | 135 | 9.4E-24 | – | |
| CDD | 69 | 179 | 111 | 2.0246E-18 | – | |
| TIGRFAM | 69 | 171 | 103 | 1.3E-11 | ||
| SUPERFAMILY | 69 | 179 | 111 | 1.26E-19 | ||
| Pfam | 93 | 167 | 75 | 3.5E-8 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Acyl-CoA hydrolase activity | Catalysis of the reaction: acyl-CoA + H2O = CoA + a carboxylate. |
Expression pattern of LotjaGi1g1v0467300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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