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Lj0g3v0361589.1

Overview

Field Value
Gene ID Lj0g3v0361589
Transcript ID Lj0g3v0361589.1
Lotus japonicus genome version MG20 v3.0
Description Exostosin family protein isoform 1 [Theobroma cacao] gi|508717444|gb|EOY09341.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 19 19
TMHMM 17 39 23
Phobius 20 41 22
Phobius 42 744 703
ProSiteProfiles 119 152 34 10.286
CDD 126 151 26 0.00977752
ProSitePatterns 140 151 12
ProSitePatterns 140 151 12
PANTHER 165 506 342 8.00E-243
PANTHER 165 506 342 8.00E-243
Pfam 347 699 353 2.00E-80
PANTHER 532 725 194 8.00E-243
PANTHER 532 725 194 8.00E-243

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Biological process Protein glycosylation A protein modification process that results in the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid, e.g. the addition of glycan chains to proteins.
Molecular function Transferase activity, transferring glycosyl groups Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor).

Expression data

Expression pattern

Expression pattern of Lj0g3v0361589.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0361589.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.