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Lj3g3v3053380.1

Overview

Field Value
Gene ID Lj3g3v3053380
Transcript ID Lj3g3v3053380.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: probable glucuronoxylan glucuronosyltransferase IRX7-like [Glycine max] gi|356541948|ref|XP_003539434.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 38 38
PANTHER 3 444 442 1.10E-256
PANTHER 3 444 442 1.10E-256
TMHMM 36 58 23
Phobius 39 58 20
Phobius 59 455 397
Pfam 94 391 298 3.40E-73

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Biological process Protein glycosylation A protein modification process that results in the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid, e.g. the addition of glycan chains to proteins.
Molecular function Transferase activity, transferring glycosyl groups Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor).

LORE1 insertions 1

Expression data

Expression pattern

Expression pattern of Lj3g3v3053380.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v3053380.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.