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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR004353
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 7 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.468s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj3g3v1074920.1
n.a. PREDICTED: vacuolar fusion protein MON1 homolog A-like [Glycine max] gi|356543452|ref|XP_003540174.1| chr3 14430391 14435527 +
4 domain predictions
1 GO term
Lj3g3v3085560.1
n.a. PREDICTED: protein SAND-like isoform X2 [Cicer arietinum] gi|502145362|ref|XP_004505997.1| chr3 38631258 38636423 -
4 domain predictions
1 GO term
Lj3g3v3085560.2
n.a. PREDICTED: protein SAND-like isoform X1 [Cicer arietinum] gi|502145359|ref|XP_004505996.1| chr3 38631258 38637142 -
4 domain predictions
1 GO term
Lj6g3v0227270.1
n.a. PREDICTED: protein SAND-like isoform X2 [Cicer arietinum] gi|502145362|ref|XP_004505997.1| chr6 2546704 2547163 -
2 domain predictions
1 GO term
LotjaGi2g1v0359500.1
n.a. Vacuolar fusion MON1-like protein; TAIR: AT2G28390.1 SAND family protein; Swiss-Prot: sp|Q9SKN1|MON1_ARATH Vacuolar fusion protein MON1 homolog; TrEMBL-Plants: tr|A0A151TNB2|A0A151TNB2_CAJCA Protein SAND; Found in the gene: LotjaGi2g1v0359500 LjG1.1_chr2 85686955 85693080 -
4 domain predictions
1 GO term
LotjaGi3g1v0163100.1
n.a. Vacuolar fusion MON1-like protein; TAIR: AT2G28390.1 SAND family protein; Swiss-Prot: sp|Q9SKN1|MON1_ARATH Vacuolar fusion protein MON1 homolog; TrEMBL-Plants: tr|V7BYQ8|V7BYQ8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0163100 LjG1.1_chr3 22197656 22203245 +
4 domain predictions
1 GO term
LotjaGi3g1v0163100.2
n.a. Vacuolar fusion MON1-like protein; TAIR: AT2G28390.1 SAND family protein; Swiss-Prot: sp|Q9SKN1|MON1_ARATH Vacuolar fusion protein MON1 homolog; TrEMBL-Plants: tr|V7BYQ8|V7BYQ8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0163100 LjG1.1_chr3 22197680 22203143 +
4 domain predictions
1 GO term