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Lj3g3v1074920.1

Overview

Field Value
Gene ID Lj3g3v1074920
Transcript ID Lj3g3v1074920.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: vacuolar fusion protein MON1 homolog A-like [Glycine max] gi|356543452|ref|XP_003540174.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 101 101 – –
PANTHER
PTHR13027:SF7
5 391 387 5.30E-267 –
PANTHER
PTHR13027
5 391 387 5.30E-267
IPR004353
Pfam
PF03164
104 535 432 3.00E-141
IPR004353
PRINTS
PR01546
110 127 18 1.40E-61
IPR004353
PRINTS
PR01546
128 148 21 1.40E-61
IPR004353
PRINTS
PR01546
162 176 15 1.40E-61
IPR004353
PRINTS
PR01546
185 213 29 1.40E-61
IPR004353
PRINTS
PR01546
242 263 22 1.40E-61
IPR004353
PRINTS
PR01546
266 279 14 1.40E-61
IPR004353
PRINTS
PR01546
290 306 17 1.40E-61
IPR004353
PRINTS
PR01546
315 338 24 1.40E-61
IPR004353
PRINTS
PR01546
343 369 27 1.40E-61
IPR004353
PANTHER
PTHR13027
425 542 118 5.30E-267
IPR004353
PANTHER
PTHR13027:SF7
425 542 118 5.30E-267 –
PRINTS
PR01546
491 505 15 1.40E-61
IPR004353
PRINTS
PR01546
507 520 14 1.40E-61
IPR004353
PRINTS
PR01546
520 540 21 1.40E-61
IPR004353

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0006623
Biological process Protein targeting to vacuole The process of directing proteins towards the vacuole, usually using signals contained within the protein.
Subterm of

Genome browser

LORE1 insertions 16

Expression data

Expression pattern

Expression pattern of Lj3g3v1074920.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v1074920.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.