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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR004561
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 6 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.644s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj3g3v1970100.3
n.a. Isochorismate synthase [Medicago truncatula] gi|357474077|ref|XP_003607323.1| chr3 25341720 25347518 +
2 domain predictions
2 GO terms
LotjaGi3g1v0226900.1
n.a. Isochorismate synthase; TAIR: AT1G18870.1 isochorismate synthase 2; Swiss-Prot: sp|Q9M9V6|ICS2_ARATH Isochorismate synthase 2, chloroplastic; TrEMBL-Plants: tr|A0A0S3SWP9|A0A0S3SWP9_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0226900 LjG1.1_chr3 35115738 35122443 -
2 domain predictions
2 GO terms
LotjaGi3g1v0226900.2
n.a. Isochorismate synthase; TAIR: AT1G18870.1 isochorismate synthase 2; Swiss-Prot: sp|Q9ZPC0|ICS_CATRO Isochorismate synthase, chloroplastic; TrEMBL-Plants: tr|A0A0S3SWP9|A0A0S3SWP9_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0226900 LjG1.1_chr3 35115819 35123482 -
2 domain predictions
2 GO terms
LotjaGi3g1v0226900.3
n.a. Isochorismate synthase; TAIR: AT1G18870.1 isochorismate synthase 2; Swiss-Prot: sp|Q9M9V6|ICS2_ARATH Isochorismate synthase 2, chloroplastic; TrEMBL-Plants: tr|A0A0S3SWP9|A0A0S3SWP9_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0226900 LjG1.1_chr3 35116521 35120361 -
2 domain predictions
2 GO terms
LotjaGi3g1v0226900.4
n.a. Isochorismate synthase; TAIR: AT1G18870.1 isochorismate synthase 2; Swiss-Prot: sp|Q9ZPC0|ICS_CATRO Isochorismate synthase, chloroplastic; TrEMBL-Plants: tr|V7AL71|V7AL71_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0226900 LjG1.1_chr3 35116535 35121249 -
2 domain predictions
2 GO terms
LotjaGi3g1v0226900.5
n.a. Isochorismate synthase; TAIR: AT1G18870.1 isochorismate synthase 2; Swiss-Prot: sp|Q9ZPC0|ICS_CATRO Isochorismate synthase, chloroplastic; TrEMBL-Plants: tr|G7JQL8|G7JQL8_MEDTR Isochorismate synthase; Found in the gene: LotjaGi3g1v0226900 LjG1.1_chr3 35116535 35121605 -
2 domain predictions
2 GO terms