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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0226900 |
| Transcript ID | LotjaGi3g1v0226900.2 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Isochorismate synthase; TAIR: AT1G18870.1 isochorismate synthase 2; Swiss-Prot: sp|Q9ZPC0|ICS_CATRO Isochorismate synthase, chloroplastic; TrEMBL-Plants: tr|A0A0S3SWP9|A0A0S3SWP9_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0226900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:35115819..35123482) extracted from Lotus japonicus Gifu genome v1.2.
CTATGCTGACGCATTTTAAAGTGGGTTATCTACGCACTTTAAAGTGTGTTAAGTTACAAAAACGTTAAATTACAACAAAT TCTTAATAAACCAGAAACATGCAAAACACACTTTATTAATCAAGAAACAACAATTACAAGCCCAAACGAGCATAATTACA TGCAATTTTACATACCATCTAAATTAGCACGTTTGTCAAATCTGTCATCTCTAGAGATTGTTGATCCAGAGAAGATGCTG TCAGATTAAGCCACACATATTTTATGGCAATTAACTCATTCCTCAAACATTATCCTTTGGATCACTTTTCCAGAGCTGAC ATTAGTCTTCCAGCTCCTGAGATTGTTGATCTGAGCTCGTTGTTGATGCCTAAGGACCCAACCTGTTGCACCACCTTGTT TAGAGCGGACCTTGACACGTTTGTCATATCTAAGAAAAGATACTCAACACCTACGTTAGCACGTTTGCATATATGAATCG GAATATCTAACATCCAATATGACAAACGTGCTAATGTTGGAGATGAAATCCGGAGAACCCAGCCCCATACATTGTATCCA AGGAAGAAGTAAAAAAAAAAACATAGTAGAATTGTGTGAAAAAAGAGAGACATATGAACCACTATACATAGCATCTGATG AAGCATAAGAATTAACGGTCAAAATAATGTTTAACATGTGTGTTTATTATAAATTGTGAGATTTGGGAATTGAGAGTTTC ACAAGTTGACATTGGTCGGTGGCCTCACAATGCATATCTATCGCACTTTCAAAGTGCAAGCGAAACTTTTTTATGGATCT TTTCAAATTTCTTAAATTTAAAGATGACATAATAGAGGTGGGATTGTGGCAATAACAATTCCCTTGCACTATTTAAAAAC CTCCAGGATTACCTCCGAACCCTTTTAATTTGAATTTCAAAAAATAATCCTTTTAATTGATTTTTCAACTAAAAAGCCAT TCAGAAACTTAGTATTTTCCGATGGAGAAAAAAAAAACTTTTCTTAGTTTTCTAGAAATATAACAAAAAAGGAAAAAGAA AATCTATGCAAACGATAATCCAAATGAAATCTAAGCAAACTCATCCGACCCCACAAAACCATATCATAAAGTTCCCCCAT ACACTCTGCAAGAACACACAAGCCACCATTTTCTTCACTTCTTCCAAGTTCCATTCCATTCCTACACTCATTCTCTTTCC CTCATCCTTATGCTCCTCCTCACATAAACTCATGGCAACCGCCACTACTCACAAGTGGCTCACACACTTCTCCAGCACAA AACACAGCAACATCAAGAGGCAACATCAACACCAACATCAGCAGCAACATCCCTTGTATTTCATCCACCACCATGTAATG ATACTAGTACTACTACTACTGTCACTTATCTTCCTTCATTTGTCCTCAAAATTATATGTAAGGTGTTACAGCAACACATA AATGCTGGTGTAACATATTGCATGTAAGGTGTTACAAAAGTTGAAAAAACAAAAAAGTCTGTTCTGTTTTTATTTTTATA TTTTAAATTCCACCATTTTAGTTAAATCAATGCTGACCAAAAATAGAATAGGATGATTGGATTATTTTCTTTTTCATTAG AATCAATTATGTAACTCAGAAGCATTCGTAGATGTTTGTGACCAGAATTGATTTTGGCTTCAGAATTAATGTTAGAAGGT GTTCTCTCCAAACTTTGGGGGTGAACTCATTGACAAGCACACATCCTATGCCCTTGTATTATTAGATTGAAGATGCCTTA AACCTGTTATCTTAGTCACTTTATAGGATCAAGGGTTCTTCTTGGGCTTTTAGTTGTTTGGGTGGTATGTTTAGAATGAT TTATTAGATTCTTAAATTGCATAATGATTAGTTAGTGATTGTGGGGGTCATATACGGATATTTAATCAGGGCTTACATGT CTCTTATATTTGCGTATGCTACTCGTGTTAAATGAGCTTGAAGTGTTTGCTCATGATAAGGCTGGGATACCGTGAGTGGT AGCTCGGTAGGCACAGAAGGATTTCCAAACATGCACATATCTATCTTATGTTATGTCTCATTCTATTCTGTGTGACAATC TTATGTTTTTGTGTTTTTTGTTGTTCCGTTCAGAGACCCGTGTGTCAGGGATGCTACCTTTCAATGAACGGTTGCGGAGA AGGAGAATACAATGCAAGAAACCCTGTTGGCACCATAGAAACCCGGACCTTGGCACCAGTTGCATCACTTGCAATGGCTA TGTGCAGCCTCAAGATGGCAATTTCAGAGTTGAAAGCAGACCCTCCATTTTGTACCTCTTCTGGCATAGTGAGAGTGCAG GTTCCCATTGAGGAGCAGGTTGAAGCCATTGATTGGCTCCATTCTCAGAGCCACCTTCTCCTCCCTCGCTGCTTCTTTTC CGGCAGGGAACATAATCCCCGCCGTGGAAACTTGGTCAGTGTTGCTGGTGTGGGTTCAGCTGTTTTCTTTTCCCAGCCAC ATCCATTTTCCTATTGGGATTGGATATCTATAAGGAGGTAAGTGAGTCCTTGAAACTTTGATCTTTTAAGTTTGTTTTTA GAAATTTCTTTATGCCAACAAGTTAAGGCAATGTTTGGTTATCTGTTGGCACCAATGCAAACGGATGTTAATGCAAATGG ATGTAAGCGAGATAAAAAGTTAACAGAACTTTTCTTATGGATTGGAATTAAAGTTATTCATGTTTCCCTCAACTGGTATC CAAACTAATTAAAATATGAAGTCATTTCTAAATCACTCCAAGCAGCTACTACCAAGCAGAAATAACCCCTCCAAGATATA TAGAACCTCAGAATCTGTTTATAATTTTCTTCGTGCTTTGATTTATATATTTTTATAAACTACTTTCTAGGTTTCTTTCT GAGAGATCCCCTTTAATCCGTGCATATGGGGCTATCCGTTTCAATGCGAAAGCTAAGATGTCATCAGAGTGGCTGGCTTT TGGCTCTTTCTACTTCATGATTCCGCAGGTGCATACATTGTTTTTCTTTCCAAAAACTAATTTGCCATTGCATGCATGTG TTAGTATTTATAGCATCAGAAGCCAGAGATACCTAGCCAAAAAATTGACAGGTTGAGTTTAATGAGCTTGAAGGAGGTTC AATGCTTACAATAACTATTGCCTGGGACAATGCTCTTTCTTGGTCATGGGAAACTGCAATCAATGAACTCCGAGCCACAG TTTGCAAAGTGAGTGCAAAGAAACTATGCCTTTTAAATTATAAAGCTAGAGATTTTGTAAAAGCCCTCCTTTGCTTCAGG TTTCTTCTTCCATTGTTAAGTCTCCAAAACAAGCTCCTCCAACATTAATATTAAGCAGCCATAACATTCCCAGCAAAGTA GATTGGGATCTTGCTGTTAACAGAGCTTTGCAGATGATAGAGCAAGAAGATTCCTTGCTAACCAAGGTAACCTTTATCTC ATGCTTGCTTGTTACTTTTGTCCAATTTTTTTCCTTTCCCTTTCTTTTCTCTGCTTTTGCATCAAAACTTGTGCTGCAAG AATCCATTTGAAAGTCCGTTTCTTTTGCCATAATGGAAATGTAGGTTGTGCTAGCTCGTAGCACCAGAGTTGTGCCTACT GCTGATATTGATCCTCTAATGTGGTTAGCTTGCTTAAAGGTGTTGTGCTTCTCTTTTCTCTTGTCACTTACAAATTGAAT AGATTATCTTCATAATATGTAGTAGCATAATACTTATGTCCCTATTGAAACTATTACAGGTTGAAGGTGGGAATGCTTAT CAATTTTTCCTTCAGCCGCCTAATGCACCAGCATTTATCGGAAACACAGTAAGTATGATGTCTGACTATAAACTAGGAAG GTTTATATAGTCTTTCCCTCATATCATTGTTTACGATGTCATGATGTTTTGCTAAACGTTCTACAAAATATATAAATTTC ACATAATAACTTCAGTTACTTTTTTATTATTATTAAACTCATCTCAATAGCTTAATGTATACTTTAAAAGTCATTACGTG GATAACCTCTTTGAGAACTGTTTTTCTGAATTGAATCAGCAATGATAAATTTTTCTCCTGTGTTTCCATTTTAATTTTAT GAACTTGATGAATAGCCAGAGCAACTATTTCACAGAAAACGGCTCCACATTACTAGCGAGGCTTTGGCTGGAACCCGTGC TAGAGGAGTATCTCTAGCACTAGACCGTCAAATTGAACTTGATTTACTTACCAGGTTTACCTTGCTCCTTGGATCTTTGA TGTTAACCTTTGTTATATATTTGCTTTCTTTTACGCTTGTGATTTCTTTGTTTACATTTGTTTCTAGCTTCTAAACTCTT GTTGTTTTGAGTTTTTTCACAGTCCAAAGGATGACATTGAGTTTACGATAGTGAGAGATACCATAAGAAGAAAATTAGAG GTAAGCTTAGTTCTGTCATATTGATTGCTTATCTGTCACAGAAGTTACTCTGGAATATATGCTTGATTTTGTTTCTAAAT GAATTTGTCCTTGAATCCATTGATATTCATAGTCATAGGTCTAGAGAGCAAGAGATGAAGGAAAAAAAAAATATTTTAAT AAAATGATCATTGCTTGTATGATGTGAACTTTAAAAATCTGGTGTTGATATCTTTAGCCTCATGTTGCTGGTGTAAAAAA TCTGAGAGTCAAAAGGATTTTATCTGTTTCTCTAACTAAAACCTTGAAGGTAAGTTGTCCTTGATACGACAATAAGGAAA AATAGATTAAAAGGCTGGACTGTATAATGCCACACTCAGTTTGCTGTTTCAATTTGCATATAACTATTGCATCTCCTTGG AGCCATTTAAGAACTTCCTTGGTTAAGTTGAGGATAAACCATCTATCACAGGGATGTGTTTTGGCAGGCAGTATGCGAGA ACGTTGCAATCAAGCCGAAGAAAATGATAAGGAAACTACCCAGGATCCAACATTTATTTGCTCAACTAGTCGGCAAGTTA AGAAGTGAAGAAGATGAGGTAACTATAATATAGAGTGCAAATACTTGAGTTTCGTCAGGCATGCATTAAGTGGCTCTAAC TTTGAATTCTTTACGGTTAATTTTAGTTTGAAATTTTGTCATCACTGCACCCAAGTCCAGCAGTTTGTGGGTTTCCAACA GAAGAGGCACAACTTTTAATTGCAGAAACAGGTACTTCTACTTTCAGTACACTATTGTTTCTAAAGCAGTCAAATCTTTC TGTTTTTCAAAGAACTTTTAGCTTAAGCAATATAAATGGAATGATAGTCATATAGCATGCAATATTCTTTTACTCTATTT GTAGAAATTGAAATGGGAACATAGTTTGTACTAAGGCCTGAACTCCATGCAATAACTGCAAATCTAGGGGATTGGAATGT TATTGTGGCACAGTGTGATGATGATAACAGAGAAGAGTTAGTCATACAATATGCGATATATCACTGATTTAGCAAAATTC ATGATTGTGATACTAGTTATGATTGGGAGTGTTACAATATCAGCATCTACTTCGTTGCAAAGCTCTTCAAGTGTTGCTTT TATTTATCCAATTTTGGAATATTAATATGTAAAAGAATCATTTTAGAACACACTGGGTAGTGAAAATAACTAAATTATTC TCATGATGTTTCAAATTTGGTTAACAAAGTTATGACTTCAATTCACTTGGATAAAATTTGGTTACTTTCAAACACAATTT TCAGAAGTATTTGATCGAGGGATGTACGCTGGACCTGTTGGTTGGTTTGGTGGAGGAGAGAGTGAGTTTGCTGTTGGCAT CAGGTCAGCATTGGTGGAAAAGGTTAGCTACATAATTCAAGTTTGTTTTTTTTCTTGAATGACATATTTAGTTTGGGTTG GTTGGAATCTTAAGAAAATTTTAATGATAATCCAAAATGGTTCTAATTTCTAGCATTCTACTAAATTAGGGAAGAAAAAA CTGATAAATTTATTGTTAAGCTAGAGTAAGAGCACTTGATTTGGTTTAGAGTAATAAGCCCTGTTTGGAAGAGCTTATTT GAGCCTTTCTTATGGCATAAACACTTATGAAAGTGTTTGAGAGAGCTTATGTAAATAGCTTATGACCTACATATAAGCTG TTTTGAGCTTATTTTCATAAGCTATTCAGATTAGCTTATGAATAAGAGCTTGTGCTTATCCATAACCTATTTTTCAGCTT ATTCAATAAGTTTCTCAAATTAGCTTATGAATAAGTGCTTATGTGATAAACACTTATTTCCTTAAGTGTTAAATTGTTCT CTTTACCCAAACGCACCCTAAGTATCATTTGCATGTCATGTTCTAAGCAGATTTCTCCCTAAGTTTGAGGAGCAGTTTGT ATAGTTGAAGACAGTTTTTCCTTTTGTCCGTCTTGTAAAATTGGGAAAAATAGACTCTGAAAAATTCCCATGAATTTCAG AAATCTCATAGCTACACACACATTTGAATGTTTAAAAGTAGCCACATAGAAGCTTAGTCAACCAACAAGGTGCTGGTCTA GTAGTAAGCAAGCTAGACGTTGTAAGGATGAGAGGATAAGTTCAAATCCTGGGAAAGACATTTGTTGGGATGGACATGCA ACCGTTTCCCGAACGGGTGGCGACATTTGTCAAAGATAAAAAAAATAAAAAATAGAAGCTTAGTCAAGTGTTTTTTCCAC TAATTATAACATTTGCAAGTTTTTGTTATAGGATCTAGGTGCACTGATATATGCTGGAACAGGGATAGTGGAAGGAAGCA AACCTTACCTGGAGTGGGATGAGCTAGAGCTCAAAACATCTCAGGTATATTTGAACATGCCATCTTGTGCAAAACAATTC TAAACAGTTTGTTGCTTGACATGATTTATGAGCATCATTTATCTGATCTTGTAGCTCATGGATACTAAGTGGATGTTGAT TTGTTTTGTAGTTTACCAAGTTGCTCAAACTTGACTTGCCTCTGAGACAAAAAGTAGATGTAAAATGAGCTCCATCAACT AATACAGTTAGCACCGTTCATGACAAATTTATGCTGATAAACTTGGTTGATAGCCTCTATTTTCATTTATATATGATTAT TTGTATCACCACCATGAATGGTGATTGATGGTTTTTCTATATCAACCCTTGTATCAAATTATAGATTATAGATTATAAGG TCAACAATGTGAACGGTTCCCATTAATGTGTTCCCATTACATCTAAGTCAAGCTTTTCATTGTATTATAATGAATTAGAA TGATGTGTATTATTTATGCAGATTGAAAAGAGATACAATTTCTCAGAAACTAAATGGAAAATTCAATTGCTGTTTCTTCT TTTGGTTTTGCAGTTTTGCTACTTCAATTTTGAGATTTTTGCATACCATCAAAGTCAAACTACTTTGACAATGAAATACT TACAAGGAATTTTGCATCAATCAAGATGTTCTCTCAATATGTGTAATGCAGCACTATTCACAGTCTCTTCAATTCTTTTT CTTCTTCATTTTCTACCTAAAACCCTGCAATTCCAGCAATCAAAAAATATTACCATCATGGGGCTAGTGGCAACTCTAAT ATACATTTGAAGATTTCACAAATAAAACTCTAGTAGACCAAGCTTAAATCGAAGTGCATGATTGGTCAGTCATTCATGTG GGCACCAAGTCAATCTCTAAAATGGAGAACAAACTTCTGTAAGGTCCATGAAGCAATATCAAAT
CDS sequence (LotjaGi3g1v0226900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAAACGATAATCCAAATGAAATCTAAGCAAACTCATCCGACCCCACAAAACCATATCATAAAGTTCCCCCATACACT CTGCAAGAACACACAAGCCACCATTTTCTTCACTTCTTCCAAGTTCCATTCCATTCCTACACTCATTCTCTTTCCCTCAT CCTTATGCTCCTCCTCACATAAACTCATGGCAACCGCCACTACTCACAAGTGGCTCACACACTTCTCCAGCACAAAACAC AGCAACATCAAGAGGCAACATCAACACCAACATCAGCAGCAACATCCCTTGTATTTCATCCACCACCATAGACCCGTGTG TCAGGGATGCTACCTTTCAATGAACGGTTGCGGAGAAGGAGAATACAATGCAAGAAACCCTGTTGGCACCATAGAAACCC GGACCTTGGCACCAGTTGCATCACTTGCAATGGCTATGTGCAGCCTCAAGATGGCAATTTCAGAGTTGAAAGCAGACCCT CCATTTTGTACCTCTTCTGGCATAGTGAGAGTGCAGGTTCCCATTGAGGAGCAGGTTGAAGCCATTGATTGGCTCCATTC TCAGAGCCACCTTCTCCTCCCTCGCTGCTTCTTTTCCGGCAGGGAACATAATCCCCGCCGTGGAAACTTGGTCAGTGTTG CTGGTGTGGGTTCAGCTGTTTTCTTTTCCCAGCCACATCCATTTTCCTATTGGGATTGGATATCTATAAGGAGGTTTCTT TCTGAGAGATCCCCTTTAATCCGTGCATATGGGGCTATCCGTTTCAATGCGAAAGCTAAGATGTCATCAGAGTGGCTGGC TTTTGGCTCTTTCTACTTCATGATTCCGCAGGTTGAGTTTAATGAGCTTGAAGGAGGTTCAATGCTTACAATAACTATTG CCTGGGACAATGCTCTTTCTTGGTCATGGGAAACTGCAATCAATGAACTCCGAGCCACAGTTTGCAAAGTTTCTTCTTCC ATTGTTAAGTCTCCAAAACAAGCTCCTCCAACATTAATATTAAGCAGCCATAACATTCCCAGCAAAGTAGATTGGGATCT TGCTGTTAACAGAGCTTTGCAGATGATAGAGCAAGAAGATTCCTTGCTAACCAAGGTTGTGCTAGCTCGTAGCACCAGAG TTGTGCCTACTGCTGATATTGATCCTCTAATGTGGTTAGCTTGCTTAAAGGTTGAAGGTGGGAATGCTTATCAATTTTTC CTTCAGCCGCCTAATGCACCAGCATTTATCGGAAACACACCAGAGCAACTATTTCACAGAAAACGGCTCCACATTACTAG CGAGGCTTTGGCTGGAACCCGTGCTAGAGGAGTATCTCTAGCACTAGACCGTCAAATTGAACTTGATTTACTTACCAGTC CAAAGGATGACATTGAGTTTACGATAGTGAGAGATACCATAAGAAGAAAATTAGAGGCAGTATGCGAGAACGTTGCAATC AAGCCGAAGAAAATGATAAGGAAACTACCCAGGATCCAACATTTATTTGCTCAACTAGTCGGCAAGTTAAGAAGTGAAGA AGATGAGTTTGAAATTTTGTCATCACTGCACCCAAGTCCAGCAGTTTGTGGGTTTCCAACAGAAGAGGCACAACTTTTAA TTGCAGAAACAGAAGTATTTGATCGAGGGATGTACGCTGGACCTGTTGGTTGGTTTGGTGGAGGAGAGAGTGAGTTTGCT GTTGGCATCAGGTCAGCATTGGTGGAAAAGGATCTAGGTGCACTGATATATGCTGGAACAGGGATAGTGGAAGGAAGCAA ACCTTACCTGGAGTGGGATGAGCTAGAGCTCAAAACATCTCAGTTTACCAAGTTGCTCAAACTTGACTTGCCTCTGAGAC AAAAAGTAGATGTAAAATGA
Protein sequence (LotjaGi3g1v0226900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQTIIQMKSKQTHPTPQNHIIKFPHTLCKNTQATIFFTSSKFHSIPTLILFPSSLCSSSHKLMATATTHKWLTHFSSTKH SNIKRQHQHQHQQQHPLYFIHHHRPVCQGCYLSMNGCGEGEYNARNPVGTIETRTLAPVASLAMAMCSLKMAISELKADP PFCTSSGIVRVQVPIEEQVEAIDWLHSQSHLLLPRCFFSGREHNPRRGNLVSVAGVGSAVFFSQPHPFSYWDWISIRRFL SERSPLIRAYGAIRFNAKAKMSSEWLAFGSFYFMIPQVEFNELEGGSMLTITIAWDNALSWSWETAINELRATVCKVSSS IVKSPKQAPPTLILSSHNIPSKVDWDLAVNRALQMIEQEDSLLTKVVLARSTRVVPTADIDPLMWLACLKVEGGNAYQFF LQPPNAPAFIGNTPEQLFHRKRLHITSEALAGTRARGVSLALDRQIELDLLTSPKDDIEFTIVRDTIRRKLEAVCENVAI KPKKMIRKLPRIQHLFAQLVGKLRSEEDEFEILSSLHPSPAVCGFPTEEAQLLIAETEVFDRGMYAGPVGWFGGGESEFA VGIRSALVEKDLGALIYAGTGIVEGSKPYLEWDELELKTSQFTKLLKLDLPLRQKVDVK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 67 | 617 | 551 | 4.0E-270 | – | |
| PANTHER | 67 | 617 | 551 | 4.0E-270 | – | |
| Gene3D | 144 | 609 | 466 | 7.4E-99 | ||
| SUPERFAMILY | 178 | 610 | 433 | 1.22E-80 | ||
| TIGRFAM | 248 | 605 | 358 | 7.0E-100 | ||
| Pfam | 343 | 598 | 256 | 7.3E-56 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Isochorismate synthase activity | Catalysis of the reaction: chorismate = isochorismate. | ||
| Biological process | Biosynthetic process | The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones. |
Expression pattern of LotjaGi3g1v0226900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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