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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR004732
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 10 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.457s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v3329130.2
n.a. PREDICTED: transaldolase-like [Cicer arietinum] gi|502090152|ref|XP_004489137.1| chr1 37507332 37510600 +
5 domain predictions
3 GO terms
Lj4g3v2871740.1
n.a. PREDICTED: transaldolase-like [Glycine max] gi|356512932|ref|XP_003525168.1| chr4 38381911 38384738 -
2 domain predictions
3 GO terms
Lj4g3v2871740.2
n.a. PREDICTED: transaldolase-like [Cicer arietinum] gi|502139560|ref|XP_004503815.1| chr4 38383231 38384539 -
2 domain predictions
3 GO terms
Lj4g3v2871740.3
n.a. PREDICTED: transaldolase-like [Cicer arietinum] gi|502139560|ref|XP_004503815.1| chr4 38383231 38384577 -
2 domain predictions
3 GO terms
LotjaGi1g1v0552500.1
n.a. Transaldolase; TAIR: AT5G13420.1 Aldolase-type TIM barrel family protein; Swiss-Prot: sp|A9WT40|TAL_RENSM Transaldolase; TrEMBL-Plants: tr|I1KZJ0|I1KZJ0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0552500 LjG1.1_chr1 108412362 108416605 +
5 domain predictions
3 GO terms
LotjaGi1g1v0552500.2
n.a. Transaldolase; TAIR: AT5G13420.1 Aldolase-type TIM barrel family protein; Swiss-Prot: sp|A9WT40|TAL_RENSM Transaldolase; TrEMBL-Plants: tr|I1KZJ0|I1KZJ0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0552500 LjG1.1_chr1 108413158 108415560 +
5 domain predictions
3 GO terms
LotjaGi2g1v0017700.1
n.a. Transaldolase family protein; TAIR: AT5G13420.1 Aldolase-type TIM barrel family protein; Swiss-Prot: sp|Q829U5|TAL2_STRAW Transaldolase 2; TrEMBL-Plants: tr|A0A0R0JYG0|A0A0R0JYG0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0017700 LjG1.1_chr2 6011404 6015467 -
2 domain predictions
3 GO terms
LotjaGi2g1v0017700.2
n.a. Transaldolase family protein; TAIR: AT5G13420.1 Aldolase-type TIM barrel family protein; Swiss-Prot: sp|Q829U5|TAL2_STRAW Transaldolase 2; TrEMBL-Plants: tr|A0A0R0JYG0|A0A0R0JYG0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0017700 LjG1.1_chr2 6011431 6015412 -
2 domain predictions
3 GO terms
LotjaGi4g1v0422700.1
n.a. Transaldolase; TAIR: AT5G13420.1 Aldolase-type TIM barrel family protein; Swiss-Prot: sp|Q829U5|TAL2_STRAW Transaldolase 2; TrEMBL-Plants: tr|K7KRC0|K7KRC0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0422700 LjG1.1_chr4 79761368 79765108 +
5 domain predictions
3 GO terms
LotjaGi4g1v0422700.2
n.a. Transaldolase; TAIR: AT5G13420.1 Aldolase-type TIM barrel family protein; Swiss-Prot: sp|A9WT40|TAL_RENSM Transaldolase; TrEMBL-Plants: tr|K7KRC0|K7KRC0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0422700 LjG1.1_chr4 79761368 79765108 +
5 domain predictions
3 GO terms