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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR005033
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 7 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.248s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0097449.1
n.a. PREDICTED: protein AF-9 homolog [Glycine max] gi|356545002|ref|XP_003540935.1| chr0 41204354 41206538 -
2 domain predictions
1 GO term
Lj2g3v1695280.1
n.a. PREDICTED: protein AF-9 homolog [Glycine max] gi|356538281|ref|XP_003537632.1| chr2 26212207 26214910 -
4 domain predictions
1 GO term
LotjaGi2g1v0381600.1
n.a. Transcription initiation factor TFIID subunit 14b; TAIR: AT5G45600.1 YEATS family protein; Swiss-Prot: sp|Q9FH40|TA14B_ARATH Transcription initiation factor TFIID subunit 14b; TrEMBL-Plants: tr|I3T1T5|I3T1T5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0381600 LjG1.1_chr2 87811903 87814549 -
4 domain predictions
1 GO term
LotjaGi2g1v0381600.2
n.a. Transcription initiation factor TFIID subunit 14b; TAIR: AT5G45600.1 YEATS family protein; Swiss-Prot: sp|Q9FH40|TA14B_ARATH Transcription initiation factor TFIID subunit 14b; TrEMBL-Plants: tr|I3T1T5|I3T1T5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0381600 LjG1.1_chr2 87812592 87814330 -
4 domain predictions
1 GO term
LotjaGi3g1v0516000.1
n.a. Transcription initiation factor TFIID subunit 14b; TAIR: AT5G45600.1 YEATS family protein; Swiss-Prot: sp|Q9FH40|TA14B_ARATH Transcription initiation factor TFIID subunit 14b; TrEMBL-Plants: tr|V7ADV7|V7ADV7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0516000 LjG1.1_chr3 93333908 93336990 -
4 domain predictions
1 GO term
LotjaGi3g1v0516000.2
n.a. Transcription initiation factor TFIID subunit 14b; TAIR: AT5G45600.1 YEATS family protein; Swiss-Prot: sp|Q9FH40|TA14B_ARATH Transcription initiation factor TFIID subunit 14b; TrEMBL-Plants: tr|V7ADV7|V7ADV7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0516000 LjG1.1_chr3 93334423 93336827 -
4 domain predictions
1 GO term
LotjaGi3g1v0516000.3
n.a. Transcription initiation factor TFIID subunit 14b; TAIR: AT5G45600.1 YEATS family protein; Swiss-Prot: sp|Q9FH40|TA14B_ARATH Transcription initiation factor TFIID subunit 14b; TrEMBL-Plants: tr|V7ADV7|V7ADV7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0516000 LjG1.1_chr3 93334988 93336827 -
4 domain predictions
1 GO term