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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR005633
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

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Download the entire search result as a CSV file.

We have found 6 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.375s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0081139.1
n.a. PREDICTED: 60S ribosomal protein L23a-like isoform X1 [Cicer arietinum] gi|502145131|ref|XP_004505894.1| chr0 31632281 31636064 -
2 domain predictions
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Lj1g3v3194560.1
n.a. PREDICTED: 60S ribosomal protein L23a-like [Glycine max] gi|356568957|ref|XP_003552674.1| chr1 36281028 36282753 +
2 domain predictions
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Lj3g3v3154060.1
n.a. PREDICTED: 60S ribosomal protein L23a-like [Cucumis sativus] gi|449459936|ref|XP_004147702.1| chr3 39112626 39114200 +
2 domain predictions
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LotjaGi1g1v0533800.1
n.a. 50S ribosomal protein L23; TAIR: AT3G55280.1 ribosomal protein L23AB; Swiss-Prot: sp|Q9AT35|RL23A_DAUCA 60S ribosomal protein L23a; TrEMBL-Plants: tr|I3STQ8|I3STQ8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0533800 LjG1.1_chr1 106213778 106217901 +
2 domain predictions
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LotjaGi2g1v0368700.1
n.a. 50S ribosomal protein L23; TAIR: AT3G55280.1 ribosomal protein L23AB; Swiss-Prot: sp|Q9AT35|RL23A_DAUCA 60S ribosomal protein L23a; TrEMBL-Plants: tr|I3SBP7|I3SBP7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0368700 LjG1.1_chr2 86618418 86620474 +
2 domain predictions
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LotjaGi3g1v0280000.1
n.a. 50S ribosomal protein L23; TAIR: AT3G55280.1 ribosomal protein L23AB; Swiss-Prot: sp|Q9AT35|RL23A_DAUCA 60S ribosomal protein L23a; TrEMBL-Plants: tr|I3SAH8|I3SAH8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0280000 LjG1.1_chr3 55996324 56001123 +
2 domain predictions
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