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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR005772
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 7 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.447s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v4450310.1
n.a. PREDICTED: V-type proton ATPase subunit F-like isoform 1 [Solanum lycopersicum] gi|460374930|ref|XP_004233261.1| chr1 52161971 52165872 +
2 domain predictions
3 GO terms
Lj4g3v0178660.1
n.a. Uncharacterized protein isoform 3 [Theobroma cacao] gi|508709269|gb|EOY01166.1| chr4 2266957 2269836 +
2 domain predictions
3 GO terms
LotjaGi1g1v0714300.1
n.a. V-type proton ATPase subunit F; TAIR: AT4G02620.1 vacuolar ATPase subunit F family protein; Swiss-Prot: sp|Q9ZQX4|VATF_ARATH V-type proton ATPase subunit F; TrEMBL-Plants: tr|I3T175|I3T175_LOTJA V-type proton ATPase subunit F; Found in the gene: LotjaGi1g1v0714300 LjG1.1_chr1 128243810 128248319 -
3 domain predictions
3 GO terms
LotjaGi1g1v0714300.2
n.a. V-type proton ATPase subunit F; TAIR: AT4G02620.1 vacuolar ATPase subunit F family protein; Swiss-Prot: sp|Q9ZQX4|VATF_ARATH V-type proton ATPase subunit F; TrEMBL-Plants: tr|I3T175|I3T175_LOTJA V-type proton ATPase subunit F; Found in the gene: LotjaGi1g1v0714300 LjG1.1_chr1 128244620 128245795 -
3 domain predictions
3 GO terms
LotjaGi1g1v0714300.3
n.a. V-type proton ATPase subunit F; TAIR: AT4G02620.1 vacuolar ATPase subunit F family protein; Swiss-Prot: sp|Q9ZQX4|VATF_ARATH V-type proton ATPase subunit F; TrEMBL-Plants: tr|I3T175|I3T175_LOTJA V-type proton ATPase subunit F; Found in the gene: LotjaGi1g1v0714300 LjG1.1_chr1 128244620 128245931 -
3 domain predictions
3 GO terms
LotjaGi4g1v0017700.2
n.a. V-type proton ATPase subunit F; TAIR: AT4G02620.1 vacuolar ATPase subunit F family protein; Swiss-Prot: sp|Q9ZQX4|VATF_ARATH V-type proton ATPase subunit F; TrEMBL-Plants: tr|I3S5X5|I3S5X5_LOTJA V-type proton ATPase subunit F; Found in the gene: LotjaGi4g1v0017700 LjG1.1_chr4 2248827 2255889 -
3 domain predictions
3 GO terms
LotjaGi4g1v0017700.3
n.a. V-type proton ATPase subunit F; TAIR: AT4G02620.1 vacuolar ATPase subunit F family protein; Swiss-Prot: sp|Q9ZQX4|VATF_ARATH V-type proton ATPase subunit F; TrEMBL-Plants: tr|I3S5X5|I3S5X5_LOTJA V-type proton ATPase subunit F; Found in the gene: LotjaGi4g1v0017700 LjG1.1_chr4 2248827 2255896 -
3 domain predictions
3 GO terms