Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR007053
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 10 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.043s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0026789.1
n.a. NC domain-containing protein-related [Theobroma cacao] gi|508711177|gb|EOY03074.1| chr0 9939734 9941076 +
2 domain predictions
 –
Lj0g3v0085329.1
n.a. lecithin retinol acyltransferase domain protein [Arabidopsis thaliana] gi|18415178|ref|NP_568167.1| chr0 34135527 34138045 +
2 domain predictions
 –
Lj1g3v5038150.1
n.a. NC domain-containing protein-related [Theobroma cacao] gi|508703754|gb|EOX95650.1| chr1 61667712 61669891 -
2 domain predictions
 –
Lj2g3v2474520.1
n.a. NC domain-containing protein-related [Theobroma cacao] gi|508711177|gb|EOY03074.1| chr2 34733193 34736352 +
2 domain predictions
 –
LotjaGi1g1v0101800.1
n.a. NC domain-containing family protein; TAIR: AT3G02700.1 NC domain-containing protein-like protein; Swiss-Prot: sp|O95237|LRAT_HUMAN Lecithin retinol acyltransferase; TrEMBL-Plants: tr|I3SWC8|I3SWC8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0101800 LjG1.1_chr1 15510339 15513755 -
2 domain predictions
 –
LotjaGi1g1v0293300.1
n.a. NC domain-containing protein-related; TAIR: AT1G01225.1 NC domain-containing protein-like protein; Swiss-Prot: sp|Q84J46|PP262_ARATH Pentatricopeptide repeat-containing protein At3g29290; TrEMBL-Plants: tr|A0A0S3S4S3|A0A0S3S4S3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0293300 LjG1.1_chr1 71142300 71149918 -
2 domain predictions
 –
LotjaGi1g1v0794500.1
n.a. NC domain-containing protein-related; TAIR: AT1G01225.1 NC domain-containing protein-like protein; Swiss-Prot: sp|Q9JI61|LRAT_RAT Lecithin retinol acyltransferase; TrEMBL-Plants: tr|A0A0B2Q573|A0A0B2Q573_GLYSO Uncharacterized protein; Found in the gene: LotjaGi1g1v0794500 LjG1.1_chr1 136566920 136569493 -
2 domain predictions
 –
LotjaGi1g1v0794500.2
n.a. NC domain-containing protein-related; TAIR: AT1G01225.1 NC domain-containing protein-like protein; Swiss-Prot: sp|Q9JI61|LRAT_RAT Lecithin retinol acyltransferase; TrEMBL-Plants: tr|A0A0S3S4S3|A0A0S3S4S3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0794500 LjG1.1_chr1 136567135 136569162 -
2 domain predictions
 –
LotjaGi5g1v0105100.1
n.a. NC domain-containing protein; TAIR: AT5G06370.1 NC domain-containing protein-like protein; Swiss-Prot: sp|Q01IJ3|SUV3L_ORYSI ATP-dependent RNA helicase SUV3L, mitochondrial; TrEMBL-Plants: tr|A0A072VJG9|A0A072VJG9_MEDTR Lecithin retinol acyltransferase; Found in the gene: LotjaGi5g1v0105100 LjG1.1_chr5 19639094 19641860 -
2 domain predictions
 –
LotjaGi6g1v0048900.1
n.a. NC domain-containing family protein; TAIR: AT3G02700.1 NC domain-containing protein-like protein; Swiss-Prot: sp|Q9JI60|LRAT_MOUSE Lecithin retinol acyltransferase; TrEMBL-Plants: tr|A0A151SZF4|A0A151SZF4_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0048900 LjG1.1_chr6 8901553 8905208 +
2 domain predictions
 –