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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR007307
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 6 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 7.951s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v3557030.1
n.a. PREDICTED: protein LTV1 homolog isoform X1 [Cicer arietinum] gi|502179714|ref|XP_004516482.1| chr1 40859383 40863251 +
2 domain predictions
1 GO term
Lj2g3v1925720.1
n.a. PREDICTED: protein LTV1 homolog isoform X1 [Cicer arietinum] gi|502179714|ref|XP_004516482.1| chr2 28329582 28330993 +
2 domain predictions
1 GO term
Lj2g3v1925720.2
n.a. PREDICTED: protein LTV1 homolog isoform X1 [Cicer arietinum] gi|502179714|ref|XP_004516482.1| chr2 28329582 28334331 +
2 domain predictions
1 GO term
LotjaGi1g1v0590000.1
n.a. Protein LTV1 like; TAIR: AT3G49990.1 Low temperature viability protein; Swiss-Prot: sp|Q96GA3|LTV1_HUMAN Protein LTV1 homolog; TrEMBL-Plants: tr|A0A0L9TRI3|A0A0L9TRI3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0590000 LjG1.1_chr1 112986584 112990929 +
3 domain predictions
1 GO term
LotjaGi2g1v0405600.1
n.a. Protein LTV1 like; TAIR: AT3G49990.1 Low temperature viability protein; Swiss-Prot: sp|Q4V838|LTV1_XENLA Protein LTV1 homolog; TrEMBL-Plants: tr|A0A0L9TRI3|A0A0L9TRI3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0405600 LjG1.1_chr2 90226992 90232162 +
3 domain predictions
1 GO term
LotjaGi2g1v0405600.2
n.a. Protein LTV1 like; TAIR: AT3G49990.1 Low temperature viability protein; Swiss-Prot: sp|Q4V838|LTV1_XENLA Protein LTV1 homolog; TrEMBL-Plants: tr|A0A0L9TRI3|A0A0L9TRI3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0405600 LjG1.1_chr2 90226992 90233922 +
3 domain predictions
1 GO term