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PF04180

Source: Pfam

Description

Low temperature viability protein

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0042274
Biological process Ribosomal small subunit biogenesis A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a small ribosomal subunit; includes transport to the sites of protein synthesis.
Subterm of
Part of

Associated Lotus transcripts 6

Transcript Name Description Predicted domains Domain count
Lj1g3v3557030.1
– PREDICTED: protein LTV1 homolog isoform X1 [Cicer arietinum] gi|502179714|ref|XP_004516482.1|
Domains
5
Lj2g3v1925720.1
– PREDICTED: protein LTV1 homolog isoform X1 [Cicer arietinum] gi|502179714|ref|XP_004516482.1|
Domains
4
Lj2g3v1925720.2
– PREDICTED: protein LTV1 homolog isoform X1 [Cicer arietinum] gi|502179714|ref|XP_004516482.1|
Domains
5
LotjaGi1g1v0590000.1
– Protein LTV1 like; TAIR: AT3G49990.1 Low temperature viability protein; Swiss-Prot: sp|Q96GA3|LTV1_HUMAN Protein LTV1 homolog; TrEMBL-Plants: tr|A0A0L9TRI3|A0A0L9TRI3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0590000
Domains
5
LotjaGi2g1v0405600.1
– Protein LTV1 like; TAIR: AT3G49990.1 Low temperature viability protein; Swiss-Prot: sp|Q4V838|LTV1_XENLA Protein LTV1 homolog; TrEMBL-Plants: tr|A0A0L9TRI3|A0A0L9TRI3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0405600
Domains
5
LotjaGi2g1v0405600.2
– Protein LTV1 like; TAIR: AT3G49990.1 Low temperature viability protein; Swiss-Prot: sp|Q4V838|LTV1_XENLA Protein LTV1 homolog; TrEMBL-Plants: tr|A0A0L9TRI3|A0A0L9TRI3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0405600
Domains
5

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 16.67