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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0225800 |
| Transcript ID | LotjaGi2g1v0225800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glutamate carboxypeptidase 2; TAIR: AT5G19740.1 Peptidase M28 family protein; Swiss-Prot: sp|Q9M1S8|GCP2_ARATH Probable glutamate carboxypeptidase 2; TrEMBL-Plants: tr|A0A0B2S7Y3|A0A0B2S7Y3_GLYSO Putative glutamate carboxypeptidase 2; Found in the gene: LotjaGi2g1v0225800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:68296472..68301254) extracted from Lotus japonicus Gifu genome v1.2.
GAATTACATGTGTGTGTGAGAAGATAACTTCTTCTTTTGGAAAATCGTGTTTGAACAAGAACGATTTTCCATCTATTTAT ATCTCATCCTTTGTCTCTTCCGGTGCTTAACATGTTCCATATCAAATACAGTGTAACACCCTCTATCTTTGTCAAAATCA CAAGAACATAGCAGGCTAGTAGTTGCAATGATCATGAAACCATGCACTTTCTTACTAGCCATAGCCACCTCTTACTTGTT ACTTCTCGTTAATGCAACCCCAAAATCAACCTACCATTCTCTCTTCATCTCCAATTCCCTATCAGACAATGCCTCCATAG CCAACCACCTTCAAATTCTCACCCGCAGACCTCACATAGCAGGTTCTGAAGCAAACGCTGAGGCTGCAGTTTATGTACGC TCAGTCCTCACCTCCTTCAACATACCAACTCACTTTGCTTCCTACCAAGTTTCCCTCACACTCCCTCTTTCTCGCTCCTT GGTGCTCACAAACTCGCCAGCACCAGAAACAGCCACCAACTTTACTCTCCGTCAAGAAATCTACAAGGGTGATCCTTATG CTGATGTTGCAGACCAGGCTGTTCCAACATTCCACGCCTATGCCAAGTCAGGCGCCGCCACCGGACCAGTCGTGTACGCG AACTACGGAAGGGAGGAGGACTATTTGACACTCACACAGATTGGGATCAACGTTTCAGGTAGAGTCTTGATTCATAGACC ACTTAATAGTATAGCTAGACGCTCACAAACACCTCATTTTTCTCTATATCCCGCACTATTTATCACATTATATCATATAT CACATTTATTATTTCTCTCTGTTGTCTACACCTAAGAGTGTTCTATAAATCATTTTTGCAGGCACTGTTGTATTGGCGAA GTATGGGAAAATCTTTAGAGGCGACATTGTGCAGAATGCTTATGATGCCGGAGCTGCAGGGGTGGTGATATATTCAGATA GGAAGGACTGCGGTGGCGCTGGCAAGGCGCGGTGGTTCCCTGATGACAAGTGGTTGCCGCCGAGCGGGGTTCAGGTGGGG TCGGTGTTTTTGGGGAAAGGAGACCCTACAACGCCTGGTTGGCCCAGTTGTGGTGAGTGTGAGAGGCTGACTCACGATGA GGTTGAGAAGAGAGGTGATGTTCCTCTAATACCTTCATTGCCGGTGTCTGGTGAAGATGGTGACAAGATATTGAAGTCAA TTGGTGGCCCTGTTGCTAAGGATGACTGGCAGGGAAGCCAAGATGCACCTACTTACCGGGTTGGACCAGGACCAGGAATT TTACACCTCAATTATACGGTATGTTTTCTATCTAGCGGTAACTACTAGTCTACTATCATGAACCAAATTGGTTCAACATG GTATATTAGAGACTCTATGACTAAATTGTTTAGAATTCGATTCCTGTCGCTCTCAATTTTTCAAATAACAAGTTGAATTT CAGCATATAGTAGGTGAACAAGTGCATTATTCACGTTTCAAGTCCAAGTGAATCTTGCTTGAGGAGATGCATTAGAAATA TAATCATTGAGTACTTTATCAAACACCTTAAGCTTTAGCCTTTAGGGATAATTGGTTCTTGACAATTACATTATATTATG TTCTAGTGAACTTGTTATTTGTAAAATCTGTTATGGCCTGGTGCAAACATCACTTGCAAAAGTATCCGATAGGTTAAACA AGAACTGAATTGGTTAGTGGATTTTTGGGATTTGCTCTTGCAGGGACAGGATATTATAGCCACAATTCAAAATGTTATTG GTGTGATTGAAGGAGAAGAAGAGCCTGATAGGTATGCAAGAATTGAGAGCTTAGAAAATTCACAATCTTGTTTTATTGAA TTTTTTATTTAATTACTTTTGCAACTGCTTGTAGATTTGTGATTCTAGGCAATCATAGGGATGCATGGAGTTATGGTGCA GTTGATCCCAATAGTGGAACTGCAGCACTACTTGAGGTAACTTTGTTACAGCTCTGATTCGTGTAGTGTAGGACGGAATA GTGGTAAACACCTGATCCCAGCAATTTGTGGTGGTGTCACTATTCTGTAGTACACAAATTATTTTGACTTTGTAAACATG GTTTTGTTAATTCAGGCAATACCATTAAAATATACATACTACTGAAATTCAGGTAGCGGAAAGATTGAGGAAGCTTCAGA AAAGAGGATGGAAACCTAGAAGAACAATTATCTTATGCAATTGGGATGCTGAGGAATACGGTCTTGTAATTTTCTTTCTC TCTTTCTTGTCTCTCTTTTGTTATGCACAATTGGCGCATGCCTCCATGAAAGTCTAATGCGATCGTTCTTCCCTCCAGAT AGGATCAACGGAATGGGTAGAAGAGAACAGAGAAATCCTTGCTTCAAGGGCGGTTGCTTACTTGAATGTTGACGCGGCAG TTGGTGGACCGGAGGGGTTTCAGACCAGTGCCACTCCACAGCTTGATGAATTGATCAAAAGAGCAACTCAGCAGGTATCA TTGGAATATAAATAACTAGAATAAGCTTTTTTGTACATGATCAGTAAAAGAAGATGAGCACCACTGTTTGAATTAGTGAT GAATGGATTTGAATCAGTTAGGTAGAGGAACAATATATAGGGTGGATAAAAAGAAAAGTACCATTCAACATTTCTCAAAA GTAGATACATTAACTTAAACATGATGGTGGCACCAACCACATTTCTATTTTGGTATTTTTGCAGATTAAAGACCCAGATA ACTCATCTCAGACCATTTATGATTCTTGGACTGGTTCAAGTAGTTCCCCTGTGGTAAGCATATTGCAGTTGTTTACATGT TTATGTTACAAAAGGGCAGACATCTTGCTATAAAACATTCAAAGTTCTACTCTTTTAATTTTAACAGTAGTATCAGTGGT TAATGGGGATTAAACTTTAGATTAGCTATATAACTGAATATCTATCTATGCTCAAACAATTTCTCTACTTTGAAAGATTG GAAGGTTAGGAGGTGGAGGATCAGATTATGCAGCTTTTTTGCAGCATGTTGGAATTCCAGCAGCTGGCATATTTTTTGGT AAAACACAAAACTCATTCTTTTAATCAACAGTATGCAGATATATCAACAATCTCATTTCTGTTATTCATGTCCTTGTTTA ATAAATGGTTTCTCTTGAACAAAATGTCTGGAAAAAAAAGTCTTATTATTCATAGCACAATTCAAATTCCACATGACAAG GGGTTTAAATCATTTTTTTTTTTCTCACAGGTAGTACAGGTTACCCAGTATACCACTCACTATATGATGATTTCACCTGG ATGCAAAACTTTGGTGATCCTATGTTTCAAAGGCATGTTGCAGGTTGGTCTCATAAATTTCTTCTACAACTTCTATCGCA GTAAACTCTATCTCAATTGACTCTAGTGACATACTGACAGCTATTTGAAAATTACCAATAGTTCAATGCATATGAATTTC TTTTCTCACCATAGATTTAAGAAAACTTAAACATGTTACATTTTCCATCATAAGCAAACACACTTTCTGCTTGCTTATTA CTAAATGATTATGTTCTGTAAAACAGCTGCAAGTGTTTGGGGTCTAGTAGCGCTTTGGCTAGCAGATGAGGAATTCATAC CTTTTGATTATGTTTCCTATGTTAAGGAGCTCCAGGTGCGCCCACTTTAGATGCTTATTTAATCAAACATTGCAGTGGTA TACAAAATCTATTAATTCTCACTGAGACCATGAAGATCAATTCTTACAATGCAAAATATCTTAATCACAGCTTAGCTTTA AGGTACTGGAAAATGAGATTTCAAACAAAGATATAAATTTGACTCCCATACTGACCTCCATCAAGGAGTTTGAGAAAGCA GCAATTATGATAAAGAACCAGAGAAAGGTACGTCATAATTCTTAAATACCTTTTTTGGGAGGGATGAGAAGTGCAAAACA TTGAAATGCATGTGGTTCTTCAGAAATTAGAAGCAAGTAAAGGATGGACAACAAAGAAGGAGGACCATTATTTTAAAGTG AGAGAGCTGAATGATAGACTGATGATGGCTGAGCGTGCATTCACTGACAGAGATGGTCTCTTTGGAATGTCATGGTATAA GCATTTGGTAAGTTATGAAACTAACGGATTTTCTTAAAAGGAAGGATGATATGAAATAAATGCATAAAACTGGATCAAAT TGGCAATGGCTTCTCTTTTAGCATCTCTCATTTCCAGTCTTAGTCTAATTTTCTAGCATAAATTCTCGTTTAAGTAGCTG AAACATTCAATTGTCTTCTAGTCTTCCTTTTTAATTTTATTCTGGTCATTTTTCAGATATATGGACGATCGAAACACAAT GGTTATGGCTCCCAATCTTTCCCTGGAATTGATGATGCTGTAATAATAGCAAAAGATACAAAGACTGTAGAATCGTGGCT TCGAGTACAACACGAAGTATGGAGAGTCTCAAGAGTTATCAAACAGGTCTCGTTAGTTCTCTCGGGTCAACTCACATGAA TGAAGATTTACATTTTCTGGCTCGCTATGGCCATGAGTTTTGTGAGCTGAACTTTGATGCAGAGCATGTTCCCCACCCTC TTCTGTCTTATTTACTAAAGGATGTAATAGGGGTTTCTTCCCCCAGATTGGTATAGTTTTGTATCTCTGGGCTTTAGCCC TCTTTGTAATAAAAAAAACGTTAGTGAAAACATACGATTATATATATGCAGTCTAATAGAAATGCGTCATAACCCCTTTC ATCCTTGTTTGTGCCTATGCAAACCAGAAAACAGAATAGTTTTCACTCCATGCCCCTTTGTAC
CDS sequence (LotjaGi2g1v0225800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATCATGAAACCATGCACTTTCTTACTAGCCATAGCCACCTCTTACTTGTTACTTCTCGTTAATGCAACCCCAAAATC AACCTACCATTCTCTCTTCATCTCCAATTCCCTATCAGACAATGCCTCCATAGCCAACCACCTTCAAATTCTCACCCGCA GACCTCACATAGCAGGTTCTGAAGCAAACGCTGAGGCTGCAGTTTATGTACGCTCAGTCCTCACCTCCTTCAACATACCA ACTCACTTTGCTTCCTACCAAGTTTCCCTCACACTCCCTCTTTCTCGCTCCTTGGTGCTCACAAACTCGCCAGCACCAGA AACAGCCACCAACTTTACTCTCCGTCAAGAAATCTACAAGGGTGATCCTTATGCTGATGTTGCAGACCAGGCTGTTCCAA CATTCCACGCCTATGCCAAGTCAGGCGCCGCCACCGGACCAGTCGTGTACGCGAACTACGGAAGGGAGGAGGACTATTTG ACACTCACACAGATTGGGATCAACGTTTCAGGCACTGTTGTATTGGCGAAGTATGGGAAAATCTTTAGAGGCGACATTGT GCAGAATGCTTATGATGCCGGAGCTGCAGGGGTGGTGATATATTCAGATAGGAAGGACTGCGGTGGCGCTGGCAAGGCGC GGTGGTTCCCTGATGACAAGTGGTTGCCGCCGAGCGGGGTTCAGGTGGGGTCGGTGTTTTTGGGGAAAGGAGACCCTACA ACGCCTGGTTGGCCCAGTTGTGGTGAGTGTGAGAGGCTGACTCACGATGAGGTTGAGAAGAGAGGTGATGTTCCTCTAAT ACCTTCATTGCCGGTGTCTGGTGAAGATGGTGACAAGATATTGAAGTCAATTGGTGGCCCTGTTGCTAAGGATGACTGGC AGGGAAGCCAAGATGCACCTACTTACCGGGTTGGACCAGGACCAGGAATTTTACACCTCAATTATACGGGACAGGATATT ATAGCCACAATTCAAAATGTTATTGGTGTGATTGAAGGAGAAGAAGAGCCTGATAGATTTGTGATTCTAGGCAATCATAG GGATGCATGGAGTTATGGTGCAGTTGATCCCAATAGTGGAACTGCAGCACTACTTGAGGTAGCGGAAAGATTGAGGAAGC TTCAGAAAAGAGGATGGAAACCTAGAAGAACAATTATCTTATGCAATTGGGATGCTGAGGAATACGGTCTTATAGGATCA ACGGAATGGGTAGAAGAGAACAGAGAAATCCTTGCTTCAAGGGCGGTTGCTTACTTGAATGTTGACGCGGCAGTTGGTGG ACCGGAGGGGTTTCAGACCAGTGCCACTCCACAGCTTGATGAATTGATCAAAAGAGCAACTCAGCAGATTAAAGACCCAG ATAACTCATCTCAGACCATTTATGATTCTTGGACTGGTTCAAGTAGTTCCCCTGTGATTGGAAGGTTAGGAGGTGGAGGA TCAGATTATGCAGCTTTTTTGCAGCATGTTGGAATTCCAGCAGCTGGCATATTTTTTGGTAGTACAGGTTACCCAGTATA CCACTCACTATATGATGATTTCACCTGGATGCAAAACTTTGGTGATCCTATGTTTCAAAGGCATGTTGCAGCTGCAAGTG TTTGGGGTCTAGTAGCGCTTTGGCTAGCAGATGAGGAATTCATACCTTTTGATTATGTTTCCTATGTTAAGGAGCTCCAG CTTAGCTTTAAGGTACTGGAAAATGAGATTTCAAACAAAGATATAAATTTGACTCCCATACTGACCTCCATCAAGGAGTT TGAGAAAGCAGCAATTATGATAAAGAACCAGAGAAAGAAATTAGAAGCAAGTAAAGGATGGACAACAAAGAAGGAGGACC ATTATTTTAAAGTGAGAGAGCTGAATGATAGACTGATGATGGCTGAGCGTGCATTCACTGACAGAGATGGTCTCTTTGGA ATGTCATGGTATAAGCATTTGATATATGGACGATCGAAACACAATGGTTATGGCTCCCAATCTTTCCCTGGAATTGATGA TGCTGTAATAATAGCAAAAGATACAAAGACTGTAGAATCGTGGCTTCGAGTACAACACGAAGTATGGAGAGTCTCAAGAG TTATCAAACAGGTCTCGTTAGTTCTCTCGGGTCAACTCACATGA
Protein sequence (LotjaGi2g1v0225800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIMKPCTFLLAIATSYLLLLVNATPKSTYHSLFISNSLSDNASIANHLQILTRRPHIAGSEANAEAAVYVRSVLTSFNIP THFASYQVSLTLPLSRSLVLTNSPAPETATNFTLRQEIYKGDPYADVADQAVPTFHAYAKSGAATGPVVYANYGREEDYL TLTQIGINVSGTVVLAKYGKIFRGDIVQNAYDAGAAGVVIYSDRKDCGGAGKARWFPDDKWLPPSGVQVGSVFLGKGDPT TPGWPSCGECERLTHDEVEKRGDVPLIPSLPVSGEDGDKILKSIGGPVAKDDWQGSQDAPTYRVGPGPGILHLNYTGQDI IATIQNVIGVIEGEEEPDRFVILGNHRDAWSYGAVDPNSGTAALLEVAERLRKLQKRGWKPRRTIILCNWDAEEYGLIGS TEWVEENREILASRAVAYLNVDAAVGGPEGFQTSATPQLDELIKRATQQIKDPDNSSQTIYDSWTGSSSSPVIGRLGGGG SDYAAFLQHVGIPAAGIFFGSTGYPVYHSLYDDFTWMQNFGDPMFQRHVAAASVWGLVALWLADEEFIPFDYVSYVKELQ LSFKVLENEISNKDINLTPILTSIKEFEKAAIMIKNQRKKLEASKGWTTKKEDHYFKVRELNDRLMMAERAFTDRDGLFG MSWYKHLIYGRSKHNGYGSQSFPGIDDAVIIAKDTKTVESWLRVQHEVWRVSRVIKQVSLVLSGQLT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 23 | 23 | - | – | |
| Phobius | 1 | 5 | 5 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 12 | 12 | - | – | |
| SignalP_EUK | 1 | 23 | 23 | - | – | |
| Phobius | 6 | 19 | 14 | - | – | |
| PANTHER | 10 | 706 | 697 | 5.7E-279 | ||
| PANTHER | 10 | 706 | 697 | 5.7E-279 | – | |
| Phobius | 20 | 23 | 4 | - | – | |
| Phobius | 24 | 707 | 684 | - | – | |
| CDD | 40 | 88 | 49 | 9.26162E-8 | – | |
| SUPERFAMILY | 41 | 547 | 507 | 3.14E-75 | – | |
| Gene3D | 41 | 549 | 509 | 5.0E-184 | – | |
| SUPERFAMILY | 88 | 328 | 241 | 1.96E-61 | – | |
| CDD | 93 | 313 | 221 | 3.81288E-72 | – | |
| Gene3D | 96 | 317 | 222 | 5.0E-184 | – | |
| Pfam | 144 | 228 | 85 | 8.1E-11 | ||
| CDD | 322 | 550 | 229 | 1.73355E-125 | – | |
| Pfam | 326 | 515 | 190 | 5.4E-24 | ||
| SUPERFAMILY | 549 | 704 | 156 | 4.84E-32 | ||
| Gene3D | 550 | 704 | 155 | 1.5E-35 | ||
| Pfam | 575 | 702 | 128 | 1.3E-28 | ||
| Coils | 584 | 604 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0225800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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