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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR007941
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 14 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.062s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v2141140.1
n.a. Transmembrane and coiled-coil domain-containing protein [Medicago truncatula] gi|357466883|ref|XP_003603726.1| chr1 25837811 25844490 -
3 domain predictions
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Lj1g3v2141140.3
n.a. Transmembrane and coiled-coil domain-containing protein [Medicago truncatula] gi|357466883|ref|XP_003603726.1| chr1 25838265 25844490 -
2 domain predictions
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Lj1g3v2141140.4
n.a. Transmembrane and coiled-coil domain-containing protein [Medicago truncatula] gi|357466883|ref|XP_003603726.1| chr1 25838265 25844490 -
3 domain predictions
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Lj1g3v2142290.1
n.a. Transmembrane and coiled-coil domain-containing protein [Medicago truncatula] gi|357466883|ref|XP_003603726.1| chr1 25873298 25878404 -
3 domain predictions
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Lj2g3v1718680.1
n.a. PREDICTED: transmembrane and coiled-coil domain-containing protein 4-like isoform X1 [Cicer arietinum] gi|502161266|ref|XP_004512100.1| chr2 26464758 26471524 +
3 domain predictions
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Lj4g3v1021120.1
n.a. PREDICTED: transmembrane and coiled-coil domain-containing protein 4-like [Cicer arietinum] gi|502153424|ref|XP_004509335.1| chr4 14574860 14582950 -
3 domain predictions
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LotjaGi1g1v0425100.1
n.a. Transmembrane and coiled-coil domain-containing protein 4; TAIR: AT4G36210.3 transmembrane/coiled-coil protein (DUF726); Swiss-Prot: sp|Q20035|TMCO4_CAEEL Uncharacterized membrane protein F35D11.3; TrEMBL-Plants: tr|A0A072V3H7|A0A072V3H7_MEDTR Transmembrane and coiled-coil protein; Found in the gene: LotjaGi1g1v0425100 LjG1.1_chr1 91966507 91974260 -
3 domain predictions
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LotjaGi1g1v0425100.2
n.a. Transmembrane and coiled-coil domain-containing protein 4; TAIR: AT4G36210.3 transmembrane/coiled-coil protein (DUF726); Swiss-Prot: sp|Q91WU4|TMCO4_MOUSE Transmembrane and coiled-coil domain-containing protein 4; TrEMBL-Plants: tr|G7J4N6|G7J4N6_MEDTR Transmembrane and coiled-coil protein; Found in the gene: LotjaGi1g1v0425100 LjG1.1_chr1 91966507 91974260 -
3 domain predictions
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LotjaGi2g1v0384200.1
n.a. Transmembrane and coiled-coil domain-containing protein 4; TAIR: AT4G36210.3 transmembrane/coiled-coil protein (DUF726); Swiss-Prot: sp|Q20035|TMCO4_CAEEL Uncharacterized membrane protein F35D11.3; TrEMBL-Plants: tr|A0A151TIT5|A0A151TIT5_CAJCA Putative membrane protein F35D11.3; Found in the gene: LotjaGi2g1v0384200 LjG1.1_chr2 88057988 88065460 +
3 domain predictions
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LotjaGi2g1v0384200.2
n.a. Transmembrane and coiled-coil domain-containing protein 4; TAIR: AT4G36210.3 transmembrane/coiled-coil protein (DUF726); Swiss-Prot: sp|Q20035|TMCO4_CAEEL Uncharacterized membrane protein F35D11.3; TrEMBL-Plants: tr|A0A151TIT5|A0A151TIT5_CAJCA Putative membrane protein F35D11.3; Found in the gene: LotjaGi2g1v0384200 LjG1.1_chr2 88057997 88065311 +
3 domain predictions
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LotjaGi2g1v0384200.3
n.a. Transmembrane and coiled-coil domain-containing protein 4; TAIR: AT4G36210.3 transmembrane/coiled-coil protein (DUF726); Swiss-Prot: sp|Q20035|TMCO4_CAEEL Uncharacterized membrane protein F35D11.3; TrEMBL-Plants: tr|A0A151TIT5|A0A151TIT5_CAJCA Putative membrane protein F35D11.3; Found in the gene: LotjaGi2g1v0384200 LjG1.1_chr2 88058490 88065174 +
3 domain predictions
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LotjaGi4g1v0125000.1
n.a. Transmembrane and coiled-coil domain-containing protein 4; TAIR: AT4G36210.3 transmembrane/coiled-coil protein (DUF726); Swiss-Prot: sp|Q91WU4|TMCO4_MOUSE Transmembrane and coiled-coil domain-containing protein 4; TrEMBL-Plants: tr|A0A151R318|A0A151R318_CAJCA Transmembrane and coiled-coil domain-containing protein 4; Found in the gene: LotjaGi4g1v0125000 LjG1.1_chr4 18205040 18213275 -
3 domain predictions
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LotjaGi4g1v0125000.2
n.a. Transmembrane and coiled-coil domain-containing protein 4; TAIR: AT4G36210.3 transmembrane/coiled-coil protein (DUF726); Swiss-Prot: sp|O14244|YELD_SCHPO Uncharacterized membrane protein C6F6.13c; TrEMBL-Plants: tr|A0A0R0KSU6|A0A0R0KSU6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0125000 LjG1.1_chr4 18205293 18212875 -
3 domain predictions
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LotjaGi4g1v0125000.3
n.a. Transmembrane and coiled-coil domain-containing protein 4; TAIR: AT4G36210.1 transmembrane/coiled-coil protein (DUF726); Swiss-Prot: sp|Q5TGY1|TMCO4_HUMAN Transmembrane and coiled-coil domain-containing protein 4; TrEMBL-Plants: tr|A0A151R318|A0A151R318_CAJCA Transmembrane and coiled-coil domain-containing protein 4; Found in the gene: LotjaGi4g1v0125000 LjG1.1_chr4 18206820 18209638 -
3 domain predictions
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