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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR008046
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 6 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.581s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0187359.1
n.a. PREDICTED: DNA replication licensing factor MCM3 homolog [Cicer arietinum] gi|502141886|ref|XP_004504687.1| chr0 91398004 91399538 +
2 domain predictions
4 GO terms
Lj4g3v0258690.1
n.a. PREDICTED: DNA replication licensing factor MCM3 homolog [Cicer arietinum] gi|502141886|ref|XP_004504687.1| chr4 3199415 3205112 -
2 domain predictions
4 GO terms
LotjaGi4g1v0023500.1
n.a. DNA helicase; TAIR: AT5G46280.1 Minichromosome maintenance (MCM2/3/5) family protein; Swiss-Prot: sp|Q9FL33|MCM3_ARATH DNA replication licensing factor MCM3; TrEMBL-Plants: tr|V7CNV8|V7CNV8_PHAVU DNA helicase; Found in the gene: LotjaGi4g1v0023500 LjG1.1_chr4 2898816 2904927 -
2 domain predictions
4 GO terms
LotjaGi4g1v0023500.2
n.a. DNA helicase; TAIR: AT5G46280.1 Minichromosome maintenance (MCM2/3/5) family protein; Swiss-Prot: sp|Q9FL33|MCM3_ARATH DNA replication licensing factor MCM3; TrEMBL-Plants: tr|V7CNV8|V7CNV8_PHAVU DNA helicase; Found in the gene: LotjaGi4g1v0023500 LjG1.1_chr4 2899714 2904824 -
2 domain predictions
4 GO terms
LotjaGi4g1v0024000_LC.1
n.a. DNA helicase; TAIR: AT5G46280.1 Minichromosome maintenance (MCM2/3/5) family protein; Swiss-Prot: sp|Q43704|MCM31_MAIZE DNA replication licensing factor MCM3 homolog 1; TrEMBL-Plants: tr|V7CNV8|V7CNV8_PHAVU DNA helicase; Found in the gene: LotjaGi4g1v0024000_LC LjG1.1_chr4 2947599 2948468 -
2 domain predictions
4 GO terms
LotjaGi4g1v0024100_LC.1
n.a. DNA helicase; TAIR: AT5G46280.1 Minichromosome maintenance (MCM2/3/5) family protein; Swiss-Prot: sp|Q9FL33|MCM3_ARATH DNA replication licensing factor MCM3; TrEMBL-Plants: tr|A0A1J7GK28|A0A1J7GK28_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0024100_LC LjG1.1_chr4 2948658 2950548 -
2 domain predictions
4 GO terms